Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev06g1516 | ATGGCCTCCAAGGTGCTTTTGCAGAGAAGGCTCTTCTTCAGGCTCTTCCAACTCTCGCCACCATCTTCTCCTTCCTCTTCTTACCGGTTTCTATCTGTTAAAGCATCAGAAATCTTGGGTTACTTAAGCCACAACGCTCATCATCTTCCTCCACTATCAGCTTCTTATAGAACCTTCTGTTCTCGCGGTTCGAATCTTCTGGATCAATCTCAGGCCCCCACCGCCATCGATTACCGTTCTCTACTGCAGGAGGGAGAATTCCACAGGCTGGCTGATTCCACAATACATAGCATACAAGAGAAACTTGAGGACTATGGAGACGATGTTGAAGTTGATGGATTTGATATAGACTATGGGAATGATGTTTTGACCGTAAAACTTGGTGATCTGGGTACCTATGTATTGAACAAACAAACACCAAATAGACAACTTTGGCTTTCTTCTCCTTTAAGTGGTCCCTCAAGGTTTGATTGGGATCAGGATACTAAAGCTTGGATTTATAGAAGGACCAAAGCAAACTTGTACAAAATTTTGGAAGCTGAGTTGGAGCAACTGTGTGGCAAACCTATTGTTTTATCCTAA | 582 | 0.4313 | MASKVLLQRRLFFRLFQLSPPSSPSSSYRFLSVKASEILGYLSHNAHHLPPLSASYRTFCSRGSNLLDQSQAPTAIDYRSLLQEGEFHRLADSTIHSIQEKLEDYGDDVEVDGFDIDYGNDVLTVKLGDLGTYVLNKQTPNRQLWLSSPLSGPSRFDWDQDTKAWIYRRTKANLYKILEAELEQLCGKPIVLS* | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev06g1516 | 193 | SMART | Frataxin_Cyay_2 | 82 | 193 | IPR002908 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | CDD | Frataxin | 82 | 190 | - | - | |
| Aev06g1516 | 193 | ProSitePatterns | Frataxin family signature. | 134 | 148 | IPR020895 | - | |
| Aev06g1516 | 193 | TIGRFAM | mito_frataxin: frataxin | 86 | 183 | IPR017789 | GO:0004322|GO:0005739 | |
| Aev06g1516 | 193 | Pfam | Frataxin-like domain | 83 | 189 | IPR002908 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | Gene3D | Frataxin/CyaY | 75 | 193 | IPR036524 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | PANTHER | FRATAXIN | 28 | 191 | IPR002908 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | TIGRFAM | FeS_CyaY: iron donor protein CyaY | 84 | 191 | IPR002908 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | PRINTS | Frataxin signature | 120 | 135 | IPR002908 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | PRINTS | Frataxin signature | 135 | 150 | IPR002908 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | PRINTS | Frataxin signature | 82 | 100 | IPR002908 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | SUPERFAMILY | Frataxin/Nqo15-like | 72 | 190 | IPR036524 | GO:0008199|GO:0016226 | |
| Aev06g1516 | 193 | ProSiteProfiles | Frataxin family profile. | 82 | 190 | IPR002908 | GO:0008199|GO:0016226 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev06g1516 | K19054 | - | gmx:100815916 | 266.544 |