Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1515 ATGGTTGGCGCCGCCGCCCCAAGGTTCCTATCACTCCTCACCACTCCCTTCCCTCTCCTCCGCCACCATCGCCACCGTCACCGCCACAACCTCCTCCTCCTCTCCTCCTACTTCCACCGTCTTTCATCTTCCTCTTCCCCGCTCCCTCCCCTCCTCTCTTCCCCTCTCAAACTCAAACCCTACCAACTCCATAAACGCTTTCAAACCGCTACTTCTTCTTCTTCTTCCAATTCCGACACAGCATTCTCTTCTTCCGTAAACCACCCGTGGCCTGAGTGGTCCCACTTCCTCTCCCACATCTCCTCCGCCGGATACTTCCACCCTCCGCTGCCGCTCCCCACCGAATTCGGAGCCTTCGCGCCGCCACCCGAGTTGCCGCAGCAGTTCGTAAGCGATGCCGCTGCTTGCTTGGCATTCGCCCGCCACAGACGCAACCTTTTGCTGTTGCTTTCGAGGAGAGACATTGCGGTTGTGGTGGAACATGGTGTTCCCTTTCTGTTCCGAGATGCCGATGATTCTGTCTCAAAGATGAAAGCTTTTGTGTCCAACAATGATGCCATTTTGTTTGAGACTAACGGAGCAACTATGGTTGATCTGATGAAATTTATGCTGAGTTATGCAAGTAGCCCATTGATCTCATCAGAAAGCAACAATCTCTATAACAGAGATCTTGTTGAATCATCTGTCAGAAATTTATTTAGTGAACTTTTCAAGCTCAGTTACAATGCACGTAGACCTAACTCTTCTGATTCGGTGCAAAATCAAGTGTCTGGTGGATTTGGACAGACGATGAGTCCTGGACAAAATATTGAAATGAAGAGGGGTGATTGGGTTTGCCCAAGGTGTAGTTTCATGAATTTTGCAAGAAATGTTAAATGCCGTGAATGTGACGAGGCAAGGCCGAAAAGACAACTGGCAGGAGGAGAATGGGAATGTCCTCAGTGTGATTTCTATAATTATGGGAGGAATATGGCTTGCTTAAGGTGTGATTGCAAACGTCCTGGACAAATATCTTTGGATCCCATGAACACCACGTCAAATATGGGGTATGGAAATGGGGGCAATACTAGCACTTCAGATGTTGATAGTAGATTAGCTGCTAATGAAGAGAAGGCACAGCGTTGGTTTAGTAAGGTTTCTCAACTAGACAGTAGCGCTGATATTAATAGTCTAATAGCAGATGAAGATTTTCCTGAAATAATGCCATTAAGGAAAGGAGTAAATAGATTTGTTGTGAGCACTAGGAAAACTCCATTGGAGAGGAGGTTGGCCAATGCTCAATACAGGAGAAACTTGGACTATAATGGCACTCCTGGCGTTGATGATTTCAAAGCTGAGGAGTCAACAAATTCCCATGATACTCAGGGTGACAATCTAGGTCCTTCAGCTGGTGTTTCTCAATCTGACAACATAGTTGCTGAATACAATAGAAATAGAGATGGCCCAGCTTCAATTGCTAGTTCTGGTTCAGGTGAGAATTCACAACTTTCTAATAACTTTACAAGCCAAAATGACATCGCAGATAATGAGAAAGAGCAAGCTGAAAAATCTGAGAGATGGTTTAGAAAGGTTACTGAGCTGCATAACATTTCTGATTTACGGACTGCAGCATCTGATGAGGACTTCCCTGAAATAATGCCCATGCGCAAAGGAGAAAATCGGTTTGTTGTAAGCAAGAAAAAGGATCGGTCTTTGACGTCACCTGCATATAAGAGACGTATGGCCATGGAGCAATCTAGCAATAGCAATTTTGTCCCCTTTGTTCCCTTCCCTCCGGATTACTTTGCCAAAAAGGACAAGCCACAGACAGATGGAAGAGATTTGACAGATAGGTCCAATGTTGAATCATCTTCAATATCCGAGGTGGCAGAGAAGCCTCCGGAGATGTCAGATGATGCTAAAGCTATAACAGACTCCCCAGACGCAAACTATGCCCAAAGTATGACCAATGCTGAAACATTGTCTGGGGTTCCAGGTAGTCCTCCAGAGATTTCAGATGATGCTAGGCTTGGGGTGGAAAGAAGAGAAATTTCAAGTCCAAAACCTTCTGAACAGAACCCAATTAATAATGATGTTGGTTCTATTTATGGGGCAACAACCAGATGTAATTCAAGTCAGAGTTTCAATAAAATGGATTCCGTGGAAAAGTATTCCGGTAACCAGAATAAAGATCAAGTGCCAAATTTGACTGGGAGTTCATCCCCAGCATCGGAGAACCAGAGCGGCAGAGCACAATGGACAGGAAAGAGTTTGGAGGGGTCAGCCGTGAAGGAGCCGGATCCTTTGGACATGTCAGAGGAGGCAAAGGCGGAGAGGTGGTTCCGTCGTGTTGCACAGATCAAGGACATCTCTGAGCTCAGCCAGATTCCTGATGAAGATTTTCCCTCAATAATGCCTATGCGCAAAGGGGTGAATAGATTTGTTGTGAGCAAGAGGAAAACACCATTGGAAAGGAGATTAACATCTCAACAATACCGAAGAAATCTTCCAATTGTGAGCTCTGATCCTGTTAAAAAAGAAAATGAAGGTAGCTGA 2535 0.4544 MVGAAAPRFLSLLTTPFPLLRHHRHRHRHNLLLLSSYFHRLSSSSSPLPPLLSSPLKLKPYQLHKRFQTATSSSSSNSDTAFSSSVNHPWPEWSHFLSHISSAGYFHPPLPLPTEFGAFAPPPELPQQFVSDAAACLAFARHRRNLLLLLSRRDIAVVVEHGVPFLFRDADDSVSKMKAFVSNNDAILFETNGATMVDLMKFMLSYASSPLISSESNNLYNRDLVESSVRNLFSELFKLSYNARRPNSSDSVQNQVSGGFGQTMSPGQNIEMKRGDWVCPRCSFMNFARNVKCRECDEARPKRQLAGGEWECPQCDFYNYGRNMACLRCDCKRPGQISLDPMNTTSNMGYGNGGNTSTSDVDSRLAANEEKAQRWFSKVSQLDSSADINSLIADEDFPEIMPLRKGVNRFVVSTRKTPLERRLANAQYRRNLDYNGTPGVDDFKAEESTNSHDTQGDNLGPSAGVSQSDNIVAEYNRNRDGPASIASSGSGENSQLSNNFTSQNDIADNEKEQAEKSERWFRKVTELHNISDLRTAASDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRMAMEQSSNSNFVPFVPFPPDYFAKKDKPQTDGRDLTDRSNVESSSISEVAEKPPEMSDDAKAITDSPDANYAQSMTNAETLSGVPGSPPEISDDARLGVERREISSPKPSEQNPINNDVGSIYGATTRCNSSQSFNKMDSVEKYSGNQNKDQVPNLTGSSSPASENQSGRAQWTGKSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPIVSSDPVKKENEGS* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1515 844 MobiDBLite consensus disorder prediction 342 361 - -
Aev06g1515 844 MobiDBLite consensus disorder prediction 819 844 - -
Aev06g1515 844 ProSitePatterns Zinc finger RanBP2-type signature. 310 329 IPR001876 -
Aev06g1515 844 SUPERFAMILY Ran binding protein zinc finger-like 267 302 IPR036443 -
Aev06g1515 844 Pfam Zn-finger in Ran binding protein and others 274 298 IPR001876 -
Aev06g1515 844 Pfam Zn-finger in Ran binding protein and others 308 334 IPR001876 -
Aev06g1515 844 MobiDBLite consensus disorder prediction 481 507 - -
Aev06g1515 844 MobiDBLite consensus disorder prediction 430 466 - -
Aev06g1515 844 SMART zf_4 308 332 IPR001876 -
Aev06g1515 844 SMART zf_4 275 299 IPR001876 -
Aev06g1515 844 MobiDBLite consensus disorder prediction 640 656 - -
Aev06g1515 844 MobiDBLite consensus disorder prediction 597 611 - -
Aev06g1515 844 MobiDBLite consensus disorder prediction 479 514 - -
Aev06g1515 844 ProSitePatterns Zinc finger RanBP2-type signature. 277 296 IPR001876 -
Aev06g1515 844 Gene3D - 304 336 - -
Aev06g1515 844 Gene3D - 264 303 - -
Aev06g1515 844 ProSiteProfiles Zinc finger RanBP2 type profile. 273 302 IPR001876 -
Aev06g1515 844 ProSiteProfiles Zinc finger RanBP2 type profile. 306 335 IPR001876 -
Aev06g1515 844 MobiDBLite consensus disorder prediction 681 748 - -
Aev06g1515 844 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 5 844 - -
Aev06g1515 844 MobiDBLite consensus disorder prediction 595 764 - -
Aev06g1515 844 PANTHER ZINC FINGER PROTEIN 5 844 - -
Aev06g1515 844 MobiDBLite consensus disorder prediction 452 466 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1515 88 340 EF-hand Containing Proteins AT1G55040 34.247 6.54e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1515 - - aip:107604755 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1515 06 10898802 10902153 Aev06g1515 06 10898802 10902153 ECH