Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1508 ATGGAATCGAGCATTCTAGAATCAATCGGCGTCGAGATCATCGGAGTAATGTCCCCAGTTTCAATCTGCATGTTCCTCGTCGTCCTCCTCGTCTACTCCCTCTCCACCTCCTCCTCCGCCGCCACTGATATCCGCACCGCCGCCAACCTCGTCTACGCCGAGAACCCCACCGATACTGCCGCACAGAAGCTCGAGGGAGCGCTTCTCAATGCCCTCGTCTTCGTCATCCTCATCGCACTCGTCACTTTCCTCCTCCTTCTGCTTTACTACTACAACTGTACCTCTTTCCTCAAGCACTATACCCGATTCAGCGCCTTCTTCGTCCTCGCCTCCATGGGTGGATCCATCTTCCTATCGCTAATCCAGCGGTTCTCAATCCCGCTCGATTCCGTCACGTGCTTAATTCTCCTCTTCAATTTCACAATCGTTGGGGTTTTATCGGTTTTTGGCACCGGGATCCCGATCGTCGTACGGCAAGGGTACATGGTATGTTTGGGGATCAGTGTTGCAGCGTGGCTGACCAAGCTGCCCGAGTGGACTACGTGGGTGCTTCTGGTGGCTCTGGCCGTTTATGACCTCGTGGCGGTTTTGGCACCCGGTGGGCCGTTGAAGCTCCTTGTTGAATTGGCGTCGAGCCGGAATGAGGAGCTTCCGGCACTGGTTTATGAGGCCCGGCCCACTGTTTCGCAGGCCGGGTCTCGTCGTGGTGGTGGTGGTGGTGGTGGGGGGACTAGTTTGGGCCTCTTGGTGGCCGGGGTCGCGGCAGGGGAGCCATCTTCTTCCCCGCCGGCCACAATTGAGCTACAATCAGTGTCTAGGGACAATGTTGATAGGAGTGGAATTAGGAATATGAGTGTGAATGAGAATTCGAATGATGGTGGGAATGAGTACTCTGTTGTGGCAATGGGGGGTTTTGGGGGTGAGAGGAATCATGGTGGGAGGGATGGTGATGATGATGATGAGGAGAGGTCACCATTGGTGGGTAGAGAGGGTGAGATTGTTGATGAGGAGATGAATGGAGTGGGGAATGAAGGGAATGTGAGGAGGGGTGGTAGTAATGATGATGTTGAGATTGCTGATAGGGGTATCAAGCTTGGGCTTGGGGACTTTGTTTTCTACAGTGTTCTTGTTGGTAGGGCTGCAATGTATGATCTCATGACTGTGTATGCTTGTTATCTTGCAATTATATCAGGGCTAGGCTGCACACTTATCTTGTTGTCGGTGTGCCGCCAAGCTCTGCCGGCGCTGCCGATTTCAATCACACTGGGTGTTGTATTTTATTTCTTGACCAGATTGCTCATGGAACCCTTCATTGTTGGGACAGCCACAAATTTGATGATGTTTTGA 1347 0.5278 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSTSSSAATDIRTAANLVYAENPTDTAAQKLEGALLNALVFVILIALVTFLLLLLYYYNCTSFLKHYTRFSAFFVLASMGGSIFLSLIQRFSIPLDSVTCLILLFNFTIVGVLSVFGTGIPIVVRQGYMVCLGISVAAWLTKLPEWTTWVLLVALAVYDLVAVLAPGGPLKLLVELASSRNEELPALVYEARPTVSQAGSRRGGGGGGGGTSLGLLVAGVAAGEPSSSPPATIELQSVSRDNVDRSGIRNMSVNENSNDGGNEYSVVAMGGFGGERNHGGRDGDDDDEERSPLVGREGEIVDEEMNGVGNEGNVRRGGSNDDVEIADRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISITLGVVFYFLTRLLMEPFIVGTATNLMMF* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1508 448 Pfam Presenilin 10 438 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev06g1508 448 PANTHER PRESENILIN 1 448 - -
Aev06g1508 448 Gene3D Presenilin 343 439 IPR042524 -
Aev06g1508 448 PANTHER PRESENILIN 1 448 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev06g1508 448 SMART psh_8 65 434 IPR006639 GO:0004190|GO:0016021
Aev06g1508 448 MobiDBLite consensus disorder prediction 310 325 - -
Aev06g1508 448 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev06g1508 448 PRINTS Presenilin family signature 192 209 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev06g1508 448 PRINTS Presenilin family signature 175 182 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev06g1508 448 MobiDBLite consensus disorder prediction 285 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1508 Aev-Chr6 10838921 10840267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1508 1 448 Miscellaneous Gene Families AT1G08700 62.737 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1508 K04505 - cpap:110807083 504.982