Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1505 ATGTTTTCACTCGCCAACTGCCACACTACCCCTTATCTTTCTCTCTCACTCACTCATTCGGCGCTCTCGATGGCCACCGTCTTCAGAACCCCCATTTTCCGGCCACCACCCACGCCGCCGCCACGCTCCTCCGCCGCGAAGCCCTCCTGCGTTGCCTTCGCTTCTTTCACGAAAATTGCTAACCGCAAAAGGAGCACCTCGCTTCCCTTCAGCTCCATGCGGTTCGCCAAGTTCGTTCCTTTCGCTTTCGACGGAGACACCGAGGCTCCGCCGCAAGTTCAAGAACCAGAGGTTCAACTTCAGGACTCTCCGGATGGTGCTGTTGGTGTAGAGGACAATGCAGGTGATGATGAGGTTAGCGGTGCTGGTGAAACAACTTCACCCTTTCTAGAGTTACTGCAATCTTATAAAGAAGCATTGGCTAATAATGATGAAGCCAAAGTTGCCGAGTTGGAATCATCATTGAAATCCATTGAAGATGAGAATATAGGTCTTGAAGGGAAGATAGCTTCTTTATCTGAAGAGTTATCAATAGAAAGGGATAGGGTTCTAAGGATTAGTGCGGACTTCGACAATTTCCGGAAGAGAACCGAGAGAGATCGTCTCTCTCTTGTCACAAATGCTCAGGGGGAAGTTGTGGAGAGTTTGTTGCCAGTATTGGATAATTTTGAGAGAGCAAAAACTCAGATTAAGGTGGAGACGGAAGGAGAGGAGAAAATAAACAACAGTTATCAAAGCATAAATAAACAGTTCATTGAAATACTAACCTCACTCGGAGTTGAACCAGTGGAGACAGTTGGAAAACCCTTTGATCCATTGCTACATGAAGCAATTATGCGCGAGGATTCTGATGAATTCGAGGATGGCATCATAATCCAAGAATTCAGAAAGGGTTTTAAACTAGGTGATCGGCTCTTACGTCCGTCAATGGTGAAAGTATCAGCTGGTCCAGGACCTGCAAAGCCTGAACAAGAAGCATCACCGAAAGAAAAAGTCACAGGTGAAGATTCAGAGGCCAGCAAAGAAAACGAGAGTAGCACGGATGCAGCGTCTGCTTGA 1059 0.4703 MFSLANCHTTPYLSLSLTHSALSMATVFRTPIFRPPPTPPPRSSAAKPSCVAFASFTKIANRKRSTSLPFSSMRFAKFVPFAFDGDTEAPPQVQEPEVQLQDSPDGAVGVEDNAGDDEVSGAGETTSPFLELLQSYKEALANNDEAKVAELESSLKSIEDENIGLEGKIASLSEELSIERDRVLRISADFDNFRKRTERDRLSLVTNAQGEVVESLLPVLDNFERAKTQIKVETEGEEKINNSYQSINKQFIEILTSLGVEPVETVGKPFDPLLHEAIMREDSDEFEDGIIIQEFRKGFKLGDRLLRPSMVKVSAGPGPAKPEQEASPKEKVTGEDSEASKENESSTDAASA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1505 352 Hamap Protein GrpE [grpE]. 116 315 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev06g1505 352 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 260 316 IPR009012 GO:0006457
Aev06g1505 352 Coils Coil 141 175 - -
Aev06g1505 352 Pfam GrpE 156 314 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev06g1505 352 CDD GrpE 180 313 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev06g1505 352 MobiDBLite consensus disorder prediction 324 343 - -
Aev06g1505 352 ProSitePatterns grpE protein signature. 270 313 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev06g1505 352 MobiDBLite consensus disorder prediction 86 124 - -
Aev06g1505 352 Gene3D - 134 257 IPR013805 -
Aev06g1505 352 PANTHER GRPE PROTEIN HOMOLOG 48 329 - -
Aev06g1505 352 PANTHER GRPE PROTEIN 48 329 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev06g1505 352 MobiDBLite consensus disorder prediction 310 352 - -
Aev06g1505 352 Gene3D Head domain of nucleotide exchange factor GrpE 259 314 IPR009012 GO:0006457
Aev06g1505 352 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 165 259 IPR013805 -
Aev06g1505 352 PRINTS GrpE protein signature 184 200 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev06g1505 352 PRINTS GrpE protein signature 294 313 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev06g1505 352 PRINTS GrpE protein signature 267 282 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aev06g1505 352 PRINTS GrpE protein signature 212 227 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1505 Aev-Chr6 10815603 10818320 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1505 K03687 - gmx:100820521 458.373