Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1504 ATGGAAGAGGATGAGCTGAAGGAGAAGCTATTATTGCAGCAGAAAAACAATAATAATAATAGTAATGATAATTCATCACCAAGATCATCATCAGAGGAAGAAGAAGAAGAAGAGCCTCTGAGGAAAAGGGTATGGGAAGAAAGCAAGAAGATGTGGGTGGTAGCAGGGCCTGCCATCTTCACAAGGTTCTCAACATTTGGAATAACTGTTGTGAGTCAATCCTTCATTGGACATATTGGATCCACTGAGCTTGCTGCATATGCACTTGTCATTACTTTACTTGTCAGGTTTGCAAATGGTGTTCTGCTAGGTATGGCAAGTGCATTGGAAACTCTATGTGGTCAAGCATATGGGGCAAAAAAATATGACATGCTTGGAGTGTACCTTCAAAGATCTTGGGTAGTCCTGTTCTTAACCTCATTATTCCTTCTCCCAATTTACATCTTCACAACCCCAATTCTAGAAGCACTAGGCCAAGAAAAAAGTATTGCTCAAGTTGCTGGAAGCATTTCTATATGGTCCATTGGTGTGGTCTTTGCCTTCTCTGTTTCATTCACATGCCAAATGTTCCTACAATCACAGAGCAAGAACAAGATCATTGTCTACCTAGCAGCAGTTTCTATTCCTACTCACATTTTCTTGTCTTGGCTTTTGACTGTTAAGTACAAGTTTGGGCTAAATGGTGCTATGACTTCAACACTTTTGGCCTATTGGATACCTAATTTTGGTCAGCTTGTGTTTATCATGACTAAGTGCCCTGACACATGGAAGGGATTCTCATTCTTGGCTTTCAAGGATCTCTGGCCTGTTATCAAGCTTTCCCTCTCTTCTGGGGCTATGTTGTGTCTTGAGATCTGGTACAATGCAGTGTTGATTCTTCTAACAGGGAACCTGAATAATGCTGAGGTTTACATTGATGCACTAGCCATATGCCTCAACATCAATGGGTGGGAAATGATGATAGCCCTTGGTTTCTTTGCTGCAGCTGGTGTAAGAGTGGCAAATGAGCTTGGAAGAGGGAGTGCAAAGGGTGCAAAATTTTCAATTATAGTGACAGTTGTGACATCACTTTGCATTGGGTTTGTGCTGTTTCTGGTATTTCTATTCCTCAGAGGAAGACTTGCTTATGTTTTCACTCCAAACCCAAAAGTGGCTGAAGCTGTTGGGGACTTATCACCTCTTCTCTCATTCTCTATTTTGTTGAATAGTGTCCAACCTGTACTCTCTGGTGTTTCTGTTGGAGCTGGGTGGCAAAGCGTTGTAGCATATGTCAACATAGGCAGTTATTACCTAATTGGTATTCCTGTTGGAGTGATTCTTGGTAACCTTCTTCATTTGCAAGTCAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTGTTCAAACTGTAATCCTAATTACAATAACACTCAAAACTGATTGGGACAAGCAGGTGGAGATAGCTCGAAATCGCATCAACAAATGGACTGTGGTGGAAAACCAAGATTCAAGCAACAACTAG 1503 0.4118 MEEDELKEKLLLQQKNNNNNSNDNSSPRSSSEEEEEEEPLRKRVWEESKKMWVVAGPAIFTRFSTFGITVVSQSFIGHIGSTELAAYALVITLLVRFANGVLLGMASALETLCGQAYGAKKYDMLGVYLQRSWVVLFLTSLFLLPIYIFTTPILEALGQEKSIAQVAGSISIWSIGVVFAFSVSFTCQMFLQSQSKNKIIVYLAAVSIPTHIFLSWLLTVKYKFGLNGAMTSTLLAYWIPNFGQLVFIMTKCPDTWKGFSFLAFKDLWPVIKLSLSSGAMLCLEIWYNAVLILLTGNLNNAEVYIDALAICLNINGWEMMIALGFFAAAGVRVANELGRGSAKGAKFSIIVTVVTSLCIGFVLFLVFLFLRGRLAYVFTPNPKVAEAVGDLSPLLSFSILLNSVQPVLSGVSVGAGWQSVVAYVNIGSYYLIGIPVGVILGNLLHLQVKGIWIGMLFGTFVQTVILITITLKTDWDKQVEIARNRINKWTVVENQDSSNN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1504 500 MobiDBLite consensus disorder prediction 1 40 - -
Aev06g1504 500 MobiDBLite consensus disorder prediction 12 27 - -
Aev06g1504 500 CDD MATE_eukaryotic 47 480 IPR045069 GO:0042910|GO:1990961
Aev06g1504 500 Pfam MatE 57 217 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev06g1504 500 Pfam MatE 279 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev06g1504 500 TIGRFAM matE: MATE efflux family protein 57 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev06g1504 500 PANTHER PROTEIN DETOXIFICATION 29 489 - -
Aev06g1504 500 PANTHER MULTIDRUG RESISTANCE PROTEIN 29 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1504 Aev-Chr6 10796263 10801638 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1504 K03327 - gmx:100775619 795.423