Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1503 ATGGAGGGAGATTTGAGGCAGAATCTGCTGAAGAAAACAGAACCAGAAGAAAAAGAAGAGGGAGAGGGATTGTCACTTGTGAAGAGAGTGTGGAAAGAGAGTGAGTTGATGTGGATAGTGGCAGCACCAGCCATTTTCACAAGAGCTTCCACATTTGGTGTTCAAGTCATAACCCAAGCATTTGTAGGACATATTGGCTCTAAGGAACTAGCTGCTTTTTCTCTTATCTTCACTGTTCTCATCAGATTTGCCAATGGTGTTCTGCTAGGAATGGCGAGTGCATTGTCAACACTATGTGGACAAGCATATGGAGCAAAGGAATATGGAATGATGGGAGTGTACCTTCAAAGATCATGGATTGTTTTGTTTGTAACTGCAGTTATACTTCTGCCTGTGTTCATCTTCACAACCCCAATTCTGATCCTATTAGGCCAAGATCCAAGCATAGCCCAAGTTGCAGGAACAATTTCCCTATGGTCAATCCCTGTTATGTTTGCTTTCATCCTTTCCTTCACATGCCAGACATTCCTTCAATCTCAGAGCAAGAACATTATCATTGCATTCCTTGGAGCATTTTCCATAGCCTTTCATTTGCTCCTCTCTTGGCTTCTGACTCTGAAGCTCCATCTTGGGATTCCTGGAGCAATGACCTCAGCTTGTGTGGCTTATTGGATTCCCAACATTGGTCAGATTGTGTTCATCACTTGTGGTTGGTGCCGCGACACGTGGCAGGGCTTTTCCTTCTTAGCATTCCAGGATCTTTGGCCTGTTATTAGGCTTTCCGTTTCATCTGGTGCCATGTTGTGTCTTGAGCTATGGTACAACACAATATTGGTTCTTTTGACTGGTAACATGAAGAATGCAGAGGTTGAAATTGATGCTCTATCCATATGTCTCAACATCAATGGCTGGGAAATGATGATATCACTTGGCTTCATGGCTGCTGCTAGTGTTCGAGTGGCTAATGAACTTGGAAAAGGAAGTGCCAAAGCAGCGACATTCTCAATTCTAGTGGCAGTGCTTACATCATTGGCCATTGGATTCATTCTGTTCTTATTTTTCTTATTCTTTAGAGAGAGACTTGCTTATATATTCACCTCAGACAAGGCTGTGGCTGCTGCTGTTGGGGATTTGTCACCTCTTTTAGCAGTCTCTATACTCCTTAACAGTGTTCAACCTGTTCTCTCTGGCGTTGCTGTTGGAGCTGGATGGCAAGGCATTGTAGCATATGTCAACATTGGATGCTACTACGCCATAGGAATTCCTGTCGGAGTTGTTCTTGGCCATGTCCTTGATTTGCAAGTCAAGGGAATTTGGATTGGAATGTTGTTTGGAACTTTGATTCAAACTATAGTGCTGATCATAATCACCTACAAAACTAATTGGGAAGAGCAGGTGATCAAAGCTCGTAATCGTATTAAAAGTCGGTCTATAGTGAACAGTAAAGACAACCAACAAACATAA 1464 0.4276 MEGDLRQNLLKKTEPEEKEEGEGLSLVKRVWKESELMWIVAAPAIFTRASTFGVQVITQAFVGHIGSKELAAFSLIFTVLIRFANGVLLGMASALSTLCGQAYGAKEYGMMGVYLQRSWIVLFVTAVILLPVFIFTTPILILLGQDPSIAQVAGTISLWSIPVMFAFILSFTCQTFLQSQSKNIIIAFLGAFSIAFHLLLSWLLTLKLHLGIPGAMTSACVAYWIPNIGQIVFITCGWCRDTWQGFSFLAFQDLWPVIRLSVSSGAMLCLELWYNTILVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVANELGKGSAKAATFSILVAVLTSLAIGFILFLFFLFFRERLAYIFTSDKAVAAAVGDLSPLLAVSILLNSVQPVLSGVAVGAGWQGIVAYVNIGCYYAIGIPVGVVLGHVLDLQVKGIWIGMLFGTLIQTIVLIIITYKTNWEEQVIKARNRIKSRSIVNSKDNQQT* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1503 487 Pfam MatE 266 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev06g1503 487 Pfam MatE 43 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev06g1503 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 476 - -
Aev06g1503 487 CDD MATE_eukaryotic 33 468 IPR045069 GO:0042910|GO:1990961
Aev06g1503 487 PANTHER PROTEIN DETOXIFICATION 15 476 - -
Aev06g1503 487 TIGRFAM matE: MATE efflux family protein 43 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1503 Aev-Chr6 10780041 10785531 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1503 K03327 - gmx:100792122 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1503 06 10780041 10785531 Aev06g1503 06 10780041 10785531 ECH