Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1461 ATGGCCAAGGGTGTGATCTCTGACGACGAAGATGAGGTCGAGTACGAGGAGGACGAGAGGGACCACGGTGACGGAGCGGAAGAGGGTCGCGATGTCGACGACGACGATGAGGAAGATGAAGAGGAAGGTCAGGACGAATATGAAAATGATGGATTTATAGTGGATGATGTTGAGGATGAAGAAGAGCAGGATGAAGAAGAAAGAGGAGATAGTGATGATGAGCGACAAAAGAAGAAAAAGAGGAAGAAAAAGGAGGAGTATGTTCTTGATGAAGATGATTATGAGTTGTTGGAGGACAATAATATCAATATTCATCGGCGGAAGGACAGCAAAAAGTTCAAGCGGCTGAAAAAGGGCCAGAGGGACACCGAGGGGGAGCCCTCTGGGCTATCTGACGAAGAGGAGTTTGTTGGGAGTGGTAAAGTTGGGCGAACTGCTGAGGAGAAGCTTAAACGTACTTTATTTGGTGATGATGAAGGGGCTCCGCTTGAAGACATTGCTGAAGAAGAGGAACAAGTAGAGGAGGAGGAGGATGATGCAGACATTGGAGAAGATGATGAAATGGCTGACTTCATTGTGGATGAAGAAGAAGTTGATGAGAATGGAGCTCCTATGAGAAAAAGAAAGCCAAAGAGAAAGAAACCTAGGCAGGCACCAGGTGTCTCTTCCTCAGATTTACAAGAAGCTCACGAATTATTTGGTGATGTCGAGGAGCTTCTGGATCATCGCCGAAAAAATCAACGAATGCAAGATTATAGAGAGACTAGACTCGAAGAACAGTTTGAGCCTATTGTTCTTTCTGAGAAGTATATGACAGAGAAAGATGACCAAATAAGGGAGCTAGATATTCCTGAGAGAATGCAGATAGCAGAGGAAAGCACTGGTGCTCCTCCATTGGATGGAGGTAGTATAGAAGAAGAGAGCCAGTGGATAGTTAGTCAACTTGGAAATGGAGCAGTCCCTTGGATTTCCAAGAAAACAGCTAGCACCCAGAATGGGAGAAAAGAACTACCAATTGAGAAGGATGATATTATCAGATTCTTGGAAATGCATCATGTTCAAAAATTAGATATTCCTTTTATTTCTATGTATAGGAAAGAGGAGTGCTTAAGCCTATTAAAAGACCTAGAGGTAGTATCTGAAGGTGGTGATGAGACTTGGGATAAGAATAACAGGACACCTACTCTAAGATGGCACAAGGTACTCTGGGCTCTACAGGACTTGGACAGGAAGTGGTTGCTTCTTCAGAAGCGAAAGAGTGCCCTTCAATCATACTATAGTAAACGCTTTGAAGAAGAGTGTCGCCGTGTTGATGATGAAACAAGACTAAACTTGAATCGGCAGTTGTTTGAATCAGTTATGAGATCTCTGAAGGAGGCAGAATCTGAGAGGGAAATTGACGATGTTGACTCAAAGTTCAACTTGCATTTTCCACCAGGTGAAGCTGGTGTTGATGAAGGCCAATACAAGAGGCCAAAAAGGAAGTCAATGTATAGCACTTTCAGTAAGGCAGGTCTGTGGGAAGTTGCTAACAGGTTTGGGTGCAGTGCTGAGCAACTTGGGTTATGTCTATCCCTGGTGGCTCTGCACGAGTTGGAGGATCCAAAGGAAACACCGGAGGAGATGGCATCAAACTTTACTTGTACCATGTATGATACCCCTCAAGAAGTACTTAAATGTGCTAGGCACATGGCAGCTGTTGAGATAAGTTGTGAGCCTAGCATTAGGAAACATGTTCGTACCCACTTTCTTGATCATGCTGTGGTATCAACATGTCCTACTGCAGATGGAAATACAACAATAGATTCTTTCCATCAGTTTTCTGGGGTAAAGTGGCTTCGGGAGAAGCCTTTATCTAAATTTGAGGATGCACAGTGGCTTCTTATACAGAAGGCAGAAGAGGAGAAACTCCTTCAAGTTACTATTAAGCTTCCTGAAGAGTATCTTAATAAGTTAATAGACCAATTTAATGAGTATTACATTAGTGACAGTGTTAGCAGATCTGCTCAACTGTGGAATGAACAGAGGAAGTTGATACTGAATGATGCAATTTTTCGATTTCTCTTACCATCAATGGAAAAGGAGGCAAGAGGTGTTTTGGCGAGCAAGGCTAAAAATTGGTTACTTATGGAGTATGGGAAGGCATTGTGGAGTAAGGTTTCTGTGGGGCCTTATCAACAGAAGGAAAATGATCTTAGCTCTGATGACGAGGCTGCTCCTAGGGTTATGGCCTGTTGTTGGGGCCCTGGCAAACCACAAACAACTTTTGTTATGTTAGATTCATCAGGAGAAGTGCTGGATGTGCTTTACACTGGGTCACTTACTTTCAGATCACAGAATGTAAATGACCAACAACGGAAGAAGAATGACCAGGAACGAGTGCTGAAGTTCATGACAGATCACCAACCACATGTTGTTGTCTTAGGAGCTGTAAATTTGTCTTGCACTCGTTTGAAGGAAGACATATATGAGGTCATTTTTAAGATGGTGGAGGAAAACCCTAGAGATGTTGGGCATGAAATGGATGGGCTCAGCATTGTATATGGAGATGAATCTCTTCCCCGTCTCTATGAGAATTCTCGGATTTCCTCTGAACAACTTCCATCACAGCAAGGTATAGTGAGGCGGGCTGTTGCTCTTGGTCGATATCTCCAAAACCCATTAGCAATGGTTGCAACATTATGTGGACCTAAAAGGGAAATATTGTCATGGAAACTAAGCACCTTAGAGAGCTTTCTCAACCCAGATGATAAATTTTCTATGGTTGAGCAAGTCATGGTGGATGTTACCAATCAGGTTGGCTTAGACATTAATTTAGCGATAAGTCATGAGTGGTTATTTGCTCCATTACAGTTTATTTCTGGGCTTGGTCCACGAAAGGCTGCATCCTTACAGAGATCCTTGGTGAGAGCTGGTGCAATTTTTACTCGGAAGGACTTCTTGACAGAACATAAACTGGGTAAAAAAGTGTTTGTCAACGCAGTTGGTTTTTTGCGTGTCCGACGAAGTGGTTTGGCTGCTAGCAGCAGCCAGTTTATTGATTTGTTGGATGATACAAGAATTCATCCAGAATCATATATTCTTGCTCAAGAGTTGGCTAAAGATGTGTATGACGAAGATGGCACAGGTGATGCAAATGATGACGACGATGCATTGGAGATGGCCATAGAGCACGTGAGGGACCGACCCAGCTATTTGAAAAACCTAGATGTTGAGGAATATGCTGCTGGGAAAGATCGTCAGAACAAAATAGAAACTTTCTATGACATTAAAAGAGAATTGATTCAAGGTTTCCAGGATTGGCGCAAGCAATATGAAGAACCTAGTCAGGATGAGGAATTCTACATGATTTCAGGTGAAACGGAGGAGACTCTTGCTGAAGGTAAAATTGTCCAAGCCACAGTGCGCAGAGTGCAAGCCCAGAAAGCAATATGTGGCCTTGAATCGGGAATGACTGGAATCCTTATGAAAGAAGACTATACTGATGACTGGAGAGATGTAATTGAACTCTCTGATAGGCTACATGAAGGTGACATACTCAGTTGTAAAATCAAGTCAATTCAAAAGAATAGGTATCAAGTCTTTCTTGTCTGTAGAGACAGTGAAATGAGAAACAACAGGTTTCAGAATAACCGTGATCTTGATCCTTATTACCACGAAGACCGGAGCTCTCTACAGAGTGATCAAGACAAAGCTCGGAAAGAAAAGGAACTTGCAAAGAAGCATTTTAAGCCAAGGATGATTGTCCATCCACGCTTTCAGAACATTACTGCAGATGAAGCAATGGAGTTCTTGTCTGACAAAGACCCTGGAGAAAGTATTATTCGTCCGAGTTCACGTGGGCCTTCTTATCTTACTTTAACACTTAAAATTCATGATGGAGTGTATGCCCACAAGGATATAGTTGAAGGTGGAAAGGAACACAAGGACATCACAAGCTTACTTCGAATTGGGAAGACACTAAAGATTGGGGAGGACACTTTTGAAGATTTGGATGAGGTTATGGATCGTTATGTTGATCCCTTGGTGGCTCACTTGAAGGCGATGTTAAACTATCGTAAGTTCAAGAAGGGCACAAAAGCAGAGGTTGATGAACTTTTGCGGGTGGAGAAAGCTGAGTATCCTATGCGCATAGTTTATAGCTTTGGCATCTCCCATGAACATCCTGGCACATTTATATTAACTTACATAAGAAGTACTAATCCACATCATGAGTACATTGGACTTTATCCAAAAGGATTCAGGTTCCGGAAGAAGATGTTTGAGGACATTGATCGGCTCGTGGCATATTTTCAGAGGCATATTGATGATCCCCAGCATGATTCAGCCCCCTCCATTAGATCTGTAGCTGCAATGGTGCCAATGCGAAGCCCTGCAGCTGGTGGCTCATCTGGGGCATCTGCTGGTGGTAGCTGGGGTGGTTCAAACAGTGAGGGTGGTTGGAGAGGTAACTCGTATGATAGGGATCGATCATCTACTCCCGGTTCCAGGACAGGGCGGGGTGATTACAGAAACCATAATAGAGATGAACACCCTAGTGGAGTGCCTCGTCCATATGGTGGTGGACGTGGGCGCGGACGTGGACGTGGGCGCGGTCGAGGTTCCTATGACGACAATAGAGGACACGACTCCAATAATGAGAGGCAGGACTCAGGTTATGGTGGTGGAAGCAGATGGAGTTCTGCATCAAAGGATGGGGATGATGGTTTAAGCAATTTTCCAGGTGCTAAGGTCCAAAACTCTCCAGGAAGAGAAGCTTTTCCCGGTGGCTGGGGTGGAAGCAGTGGTGGTGGCAGTAGTTGGGGAGGTGGATCTAGTGGCAATGACAACGGTGGCTGGGGACAAGGAGGTGGTGGTGCTGGTCCAAGCGATGCCGAACAAGGAAGCTCCGGCTGGGGAAGTGGCTCCAAGAAAGCCGCTAACAATGGTGGTGGATGGTCTGGAAATGCTGGTGGCAGCTCTGGTTGGTGA 4971 0.443 MAKGVISDDEDEVEYEEDERDHGDGAEEGRDVDDDDEEDEEEGQDEYENDGFIVDDVEDEEEQDEEERGDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKDSKKFKRLKKGQRDTEGEPSGLSDEEEFVGSGKVGRTAEEKLKRTLFGDDEGAPLEDIAEEEEQVEEEEDDADIGEDDEMADFIVDEEEVDENGAPMRKRKPKRKKPRQAPGVSSSDLQEAHELFGDVEELLDHRRKNQRMQDYRETRLEEQFEPIVLSEKYMTEKDDQIRELDIPERMQIAEESTGAPPLDGGSIEEESQWIVSQLGNGAVPWISKKTASTQNGRKELPIEKDDIIRFLEMHHVQKLDIPFISMYRKEECLSLLKDLEVVSEGGDETWDKNNRTPTLRWHKVLWALQDLDRKWLLLQKRKSALQSYYSKRFEEECRRVDDETRLNLNRQLFESVMRSLKEAESEREIDDVDSKFNLHFPPGEAGVDEGQYKRPKRKSMYSTFSKAGLWEVANRFGCSAEQLGLCLSLVALHELEDPKETPEEMASNFTCTMYDTPQEVLKCARHMAAVEISCEPSIRKHVRTHFLDHAVVSTCPTADGNTTIDSFHQFSGVKWLREKPLSKFEDAQWLLIQKAEEEKLLQVTIKLPEEYLNKLIDQFNEYYISDSVSRSAQLWNEQRKLILNDAIFRFLLPSMEKEARGVLASKAKNWLLMEYGKALWSKVSVGPYQQKENDLSSDDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTFRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPKREILSWKLSTLESFLNPDDKFSMVEQVMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYILAQELAKDVYDEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYAAGKDRQNKIETFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQATVRRVQAQKAICGLESGMTGILMKEDYTDDWRDVIELSDRLHEGDILSCKIKSIQKNRYQVFLVCRDSEMRNNRFQNNRDLDPYYHEDRSSLQSDQDKARKEKELAKKHFKPRMIVHPRFQNITADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKIHDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFKKGTKAEVDELLRVEKAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGASAGGSWGGSNSEGGWRGNSYDRDRSSTPGSRTGRGDYRNHNRDEHPSGVPRPYGGGRGRGRGRGRGRGSYDDNRGHDSNNERQDSGYGGGSRWSSASKDGDDGLSNFPGAKVQNSPGREAFPGGWGGSSGGGSSWGGGSSGNDNGGWGQGGGGAGPSDAEQGSSGWGSGSKKAANNGGGWSGNAGGSSGW* 1657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1461 1656 Gene3D - 1009 1101 IPR042066 -
Aev06g1461 1656 Gene3D - 1121 1209 IPR012340 -
Aev06g1461 1656 SMART rnase_8s 740 858 IPR006641 GO:0006139
Aev06g1461 1656 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 83 1600 IPR017072 GO:0032968
Aev06g1461 1656 Gene3D - 497 933 IPR023323 -
Aev06g1461 1656 Gene3D - 730 1120 IPR037027 GO:0006139
Aev06g1461 1656 MobiDBLite consensus disorder prediction 137 159 - -
Aev06g1461 1656 Pfam HHH domain 1015 1102 IPR041692 -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 161 198 - -
Aev06g1461 1656 CDD SH2_Nterm_SPT6_like 1250 1338 IPR035019 -
Aev06g1461 1656 SMART S1_6 1126 1199 IPR022967 -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 1457 1656 - -
Aev06g1461 1656 SUPERFAMILY SH2 domain 1253 1339 IPR036860 -
Aev06g1461 1656 Pfam Acidic N-terminal SPT6 33 122 IPR028083 -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 1 91 - -
Aev06g1461 1656 CDD SH2_Cterm_SPT6_like 1349 1435 IPR035018 -
Aev06g1461 1656 SUPERFAMILY Ribonuclease H-like 740 895 IPR012337 -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 9 69 - -
Aev06g1461 1656 Gene3D - 294 496 IPR023319 -
Aev06g1461 1656 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 83 1600 - -
Aev06g1461 1656 Pfam SH2 domain 1217 1434 IPR035420 -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 1209 1234 - -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 111 232 - -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 1530 1547 - -
Aev06g1461 1656 SUPERFAMILY RuvA domain 2-like 911 1001 IPR010994 -
Aev06g1461 1656 Coils Coil 166 186 - -
Aev06g1461 1656 PIRSF Spt6 2 1504 IPR017072 GO:0032968
Aev06g1461 1656 Gene3D SH2 domain 1236 1347 IPR036860 -
Aev06g1461 1656 ProSiteProfiles S1 domain profile. 1128 1199 IPR003029 GO:0003676
Aev06g1461 1656 Gene3D SH2 domain 1348 1444 IPR036860 -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 70 90 - -
Aev06g1461 1656 Pfam Helix-hairpin-helix motif 899 1000 IPR032706 -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 1468 1500 - -
Aev06g1461 1656 SUPERFAMILY Tex N-terminal region-like 334 718 - -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 1627 1656 - -
Aev06g1461 1656 Gene3D - 261 1003 - -
Aev06g1461 1656 SUPERFAMILY Nucleic acid-binding proteins 1123 1203 IPR012340 -
Aev06g1461 1656 Pfam Holliday-junction resolvase-like of SPT6 739 895 IPR028231 -
Aev06g1461 1656 MobiDBLite consensus disorder prediction 1598 1612 - -
Aev06g1461 1656 SUPERFAMILY RuvA domain 2-like 1014 1103 IPR010994 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1461 K11292 - gmx:100809136 2712.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1461 06 10332138 10341466 Aev06g1461 06 10332138 10341466 ECH