Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1440 ATGGATTCATCCTCTGTGTCCAACGACGCCGTTTCGAAGGAGTCAATGGTTGACCCCTTCTTGGTGGAGGCTCTCCAGAACCCTCGTCATCGCCTTACCATTCTGCGGATGGAGCTGGATATCCAGAGGTTTCTGAATAATCCTGATCAGCAGCATTTTGAGTTCCCTCATTTCCCTTCTTCCTATCTTCGGCTGGCTGCACATCGAGTTGCTCAACACTATGGTATGCAAACAATGGTTCAAGATAGTGGCTTAGATGGTCAGGGAAGTAAAATTCTGGTGAGGAAGTTAGCAGAAAGCAAGTATCCTGTGGTTCGCTTATCTGATATACCTGCAAAACAGTTGGAAAATGATAAATCTGAGCAGAAAAAAATTGTCCTTAGACCTAGGCCTTCTAAAACTAGTTTAAATGAAGCTAATGAAGCTGGGGCGAAGGGAAATCCTCAGAGAAGTGTTGAAGAGAGGAAGGAAGAATATGATCGGGCACGAGCACGTATCTTTAGTAACTCTAGAAGCTCTGATTTAGGAGATTCTTCATCAGTGGTCCCTATGGATGGAAAAATTTCTTTTATGAGCAAGGATGAGAATGAAACTAGCAAGAATCCCTTGGCTGATTCAGAAAGATACAATAGTGTCCGGGATGGCAGTTCTACCAGAGTTGCCATTTTCAGAGACAGGGAAAAAGACCGTAGTGATCCAGATTATGATCGTAGCTATGGAAGGTATGTTAGGAGTATTCCAGCCTCTGCTGTTAACTTGGTGCCTTTTAATTTGCAAAAAGCTCAACCTACATTTGCTCAGTATGACTCCACCTTTAGTCAGTTGGGTCAGATGACACAAGCTCCGGCTACACTTGGTTATGGACCTCCTTCAAACCCGATGATTAGTCCGTTTGGCAACACAGGATTGAATCAGACAGTTAGGGATGTTGGTTACCTACAGTGGCCAAGTGCTTCAATGATGTATGCACATTCATATGACCAATTTAGGCATGCTGTTTTCCAGGCTCCATTTGGTCAACAGCCATTGAGCTTTGACTATTCACAGAACTACTAG 1056 0.4375 MDSSSVSNDAVSKESMVDPFLVEALQNPRHRLTILRMELDIQRFLNNPDQQHFEFPHFPSSYLRLAAHRVAQHYGMQTMVQDSGLDGQGSKILVRKLAESKYPVVRLSDIPAKQLENDKSEQKKIVLRPRPSKTSLNEANEAGAKGNPQRSVEERKEEYDRARARIFSNSRSSDLGDSSSVVPMDGKISFMSKDENETSKNPLADSERYNSVRDGSSTRVAIFRDREKDRSDPDYDRSYGRYVRSIPASAVNLVPFNLQKAQPTFAQYDSTFSQLGQMTQAPATLGYGPPSNPMISPFGNTGLNQTVRDVGYLQWPSASMMYAHSYDQFRHAVFQAPFGQQPLSFDYSQNY* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1440 351 CDD R3H_encore_like 30 96 - -
Aev06g1440 351 Pfam R3H domain 33 84 IPR001374 GO:0003676
Aev06g1440 351 MobiDBLite consensus disorder prediction 190 214 - -
Aev06g1440 351 SUPERFAMILY R3H domain 6 118 IPR036867 GO:0003676
Aev06g1440 351 Gene3D - 4 132 IPR036867 GO:0003676
Aev06g1440 351 ProSiteProfiles R3H domain profile. 31 98 IPR001374 GO:0003676
Aev06g1440 351 SMART R3H_4 15 97 IPR001374 GO:0003676
Aev06g1440 351 MobiDBLite consensus disorder prediction 115 158 - -
Aev06g1440 351 Pfam SUZ domain 122 170 IPR024771 -
Aev06g1440 351 ProSiteProfiles SUZ domain profile. 101 171 IPR024771 -
Aev06g1440 351 PANTHER OS05G0411600 PROTEIN 7 350 - -
Aev06g1440 351 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 7 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1440 Aev-Chr6 10122987 10125737 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1440 - - gmx:100796710 582.022