Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1409 ATGGATAATAATGTTATTCAAGGAGAGCTTGGAAGAGTATTTCACATGTTTGATAGAGATGGTGATGGAAAAATAACAAAAAAAGAGCTAAGTGATTCCCTAAAGAACCTAGGAATATGCATCACGGAGCAAGACTTGGTGCAATTGATTGAGAAAATTGATGTGAATGGAGATGGGTTTGTTGACATGGGTGAATTTGGAGAGCTTTACCAAACAATAATGGAAGAGAGAAAGGATGAGGAAGAGGATATGAGGGAGGCATTCAATGTGTTTGATCAAAATGGTGATGGCTTCATAAGTGGTGAGGAATTAAGTGCTATTTTGTCATCTTTAGGGCTAAGACATGGAAAGACCATTGAGGATTGCAACAACATGATCAAGAAAGTTGATGTTGATGGTGATGGCATGGTTGATTTCAATGAGTTTAAGCAAATGATGAAGATTGCTGGTTTTGCTGCACCTTCATGA 468 0.3782 MDNNVIQGELGRVFHMFDRDGDGKITKKELSDSLKNLGICITEQDLVQLIEKIDVNGDGFVDMGEFGELYQTIMEERKDEEEDMREAFNVFDQNGDGFISGEELSAILSSLGLRHGKTIEDCNNMIKKVDVDGDGMVDFNEFKQMMKIAGFAAPS* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1409 155 CDD EFh 83 147 IPR002048 GO:0005509
Aev06g1409 155 ProSitePatterns EF-hand calcium-binding domain. 92 104 IPR018247 -
Aev06g1409 155 ProSiteProfiles EF-hand calcium-binding domain profile. 117 152 IPR002048 GO:0005509
Aev06g1409 155 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 6 154 - -
Aev06g1409 155 ProSiteProfiles EF-hand calcium-binding domain profile. 79 114 IPR002048 GO:0005509
Aev06g1409 155 SUPERFAMILY EF-hand 9 146 IPR011992 -
Aev06g1409 155 Gene3D - 82 148 - -
Aev06g1409 155 Pfam EF-hand domain pair 81 147 IPR002048 GO:0005509
Aev06g1409 155 Pfam EF-hand domain pair 10 71 IPR002048 GO:0005509
Aev06g1409 155 SMART efh_1 121 149 IPR002048 GO:0005509
Aev06g1409 155 SMART efh_1 83 111 IPR002048 GO:0005509
Aev06g1409 155 SMART efh_1 45 73 IPR002048 GO:0005509
Aev06g1409 155 SMART efh_1 9 37 IPR002048 GO:0005509
Aev06g1409 155 ProSitePatterns EF-hand calcium-binding domain. 54 66 IPR018247 -
Aev06g1409 155 Gene3D - 1 81 - -
Aev06g1409 155 ProSitePatterns EF-hand calcium-binding domain. 18 30 IPR018247 -
Aev06g1409 155 ProSitePatterns EF-hand calcium-binding domain. 130 142 IPR018247 -
Aev06g1409 155 ProSiteProfiles EF-hand calcium-binding domain profile. 5 40 IPR002048 GO:0005509
Aev06g1409 155 ProSiteProfiles EF-hand calcium-binding domain profile. 41 76 IPR002048 GO:0005509
Aev06g1409 155 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1409 Aev-Chr6 9798363 9798830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1409 7 153 EF-hand Containing Proteins AT3G07490 72.789 1.90e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1409 K13448 - gmx:100806637 245.358