Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1396 ATGATGGCAGCTATAATGGGTGCTGATGAATATGGGTTTGGTTCAGTGGCGATGATTGCCACTGGATGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGCGTTGCCAGTCAGAGGGAAGAGTTGCGTGCACGTTTTCCTGGTGTTCCTGGTGATCTTGTCAACTACTTTTTGTATGTTGCTGAGGAGGTACGAGGCATATTGGCACAGCTGGGGTATGAGAAGTTAGATGATGTAATTGGCCGGACAAACTTGTTGCAACCAAGAGACATATCTCTAGTGAAAACTCAGCATCTGGACCTAAATTATATCCTCTCTAGTTCTGGGTTGCCTAAATGGAGCAGTACCGAAATCAGGAATCAGGAACCACATACTAATGGTCCTGTTTTGGATGACGTTTTGCTAGCTGACCCAGAGGTTGCAGATGCCATTTCAAATGAAAAAGTAGTGAGTAAGACCATAAAAATATACAATGTTGATCGCGCTGTCTGTGGACGGATAGCTGGTGTCATTGCTAAGAAGTATGGTGACACTGGTTTTGCTGGGCAGTTGAATATAACATTTACAGGAAGTGCCGGGCAGTCATTTGGGTGCTTTTTGACACCTGGAATGAACATTCGCCTAGTAGGAGAGGCTAATGATTATGTCGGGAAGGGTATGGCTGGAGGCGAGTTGGTTGTCACTCCCGTTGACAAGATAGGGTTTCAACCCGAAGATGCCGCTATTGTGGGGAACACTTGCTTGTATGGGGCCACAGGTGGACAGGTCTTTGTTAGAGGGAAGGCTGGGGAGAGATTTGCTGTGAGAAACTCGCTTGCTGAAGCTGTGGTTGAAGGTACAGGTGATCATTGTTGCGAGTACATGACCGGTGGCTGTATTGTTGTCCTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAATGACCGGAGGGTTGGCTTACATTCTTGATGAAGACAACACTCTCATACCCAAGGTCAACAGAGAAATTGTAAAAATCCAACGAGTCTCAGCACCTGTGGGGCAGATGCAGCTGAAGAGTCTAATTGAAGCCCATGTTGAAAAATCGGGTAGCAACAAAGGTGCAGCTATTCTGAAGGATTGGGACAAGTATCTACCGCTATTCTGGCAGCTGGTTCCACCCAGTGAAGAAGACACCCCTGAGGCCAATCCCAAGTATGACACTGCTTCTACAGAGCAGGTCACTACTGTGCAGTCTGCTTAG 1230 0.4715 MMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLYVAEEVRGILAQLGYEKLDDVIGRTNLLQPRDISLVKTQHLDLNYILSSSGLPKWSSTEIRNQEPHTNGPVLDDVLLADPEVADAISNEKVVSKTIKIYNVDRAVCGRIAGVIAKKYGDTGFAGQLNITFTGSAGQSFGCFLTPGMNIRLVGEANDYVGKGMAGGELVVTPVDKIGFQPEDAAIVGNTCLYGATGGQVFVRGKAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCIVVLGKVGRNVAAGMTGGLAYILDEDNTLIPKVNREIVKIQRVSAPVGQMQLKSLIEAHVEKSGSNKGAAILKDWDKYLPLFWQLVPPSEEDTPEANPKYDTASTEQVTTVQSA* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1396 409 SUPERFAMILY FMN-linked oxidoreductases 2 112 - -
Aev06g1396 409 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 126 389 IPR036485 GO:0016491
Aev06g1396 409 Gene3D Aldolase class I 1 130 IPR013785 -
Aev06g1396 409 Gene3D - 131 406 IPR036485 GO:0016491
Aev06g1396 409 PANTHER BNAA03G19380D PROTEIN 2 397 - -
Aev06g1396 409 CDD gltB_C 133 383 IPR002489 GO:0016491
Aev06g1396 409 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 2 397 - -
Aev06g1396 409 MobiDBLite consensus disorder prediction 393 409 - -
Aev06g1396 409 Pfam GXGXG motif 158 340 IPR002489 GO:0016491
Aev06g1396 409 MobiDBLite consensus disorder prediction 384 409 - -
Aev06g1396 409 Pfam Conserved region in glutamate synthase 1 76 IPR002932 GO:0006537|GO:0015930|GO:0016638
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1396 Aev-Chr6 9665738 9668742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1396 K00284 - gmx:548016 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1396 06 9665738 9668742 Aev06g1396 06 9665738 9668742 ECH