Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1388 ATGGACGCCAAGATCGGAAGCTTCTTCGAATCCATCGGAAACTTCTTCACCGGCGGCGATCAGATCCCTTGGTGCGACGGTGACGTCATCGCCGGCTGTGAGAGAGAAGTTGCAGAGGCTGCTAAAGGCGAATCTGAGGAGCGGAAGAATGAGAGCATAATGAGGTTGTCGTGGGCGCTCGTTCATTCAAGGCAGAAAGAAGATGTTCAGCGCGGGATAGACATGCTTGAAGCTTCTTTGGGGAATGAAAGAAGTCCTTTGCATCAAAGAGAGAAGCTTTATCTCCTGGCTGTTGGATATTACAGGAGCAACAATTATACTAGGAGTCGGCAACTTTTGGGGCGATGCTTGGAGATTGCACCTGATTGGAGGCAGGCACTGTCCCTCCATAAAATAGTTGAAGATCGAATTGCTAAAGATGGAGTTATAGGAATTGGCATCACTGCAACAGCTGTGGGACTTATAGTTGGTGGTATTGCTGCAGCATTAGCCCGGAAGAACTGA 504 0.4881 MDAKIGSFFESIGNFFTGGDQIPWCDGDVIAGCEREVAEAAKGESEERKNESIMRLSWALVHSRQKEDVQRGIDMLEASLGNERSPLHQREKLYLLAVGYYRSNNYTRSRQLLGRCLEIAPDWRQALSLHKIVEDRIAKDGVIGIGITATAVGLIVGGIAAALARKN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1388 167 PIRSF TPR_repeat_11_Fis1 4 166 IPR016543 GO:0000266
Aev06g1388 167 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 1 167 IPR016543 GO:0000266
Aev06g1388 167 Pfam Fis1 N-terminal tetratricopeptide repeat 51 80 IPR028058 -
Aev06g1388 167 Pfam Fis1 C-terminal tetratricopeptide repeat 90 142 IPR028061 -
Aev06g1388 167 SUPERFAMILY TPR-like 10 166 IPR011990 GO:0005515
Aev06g1388 167 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN 1 167 - -
Aev06g1388 167 Gene3D Tetratricopeptide repeat domain 24 167 IPR011990 GO:0005515
Aev06g1388 167 CDD Fis1 23 141 IPR033745 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1388 Aev-Chr6 9586928 9589414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1388 K17969 - gmx:100785425 288.115