Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1387 ATGGAGGAAGTGGCGAGGTTGCCGGAGTACGAGAAACAGGGAGAGGCTGATGAAGACGAAAGGGGACACTTGGGAGAGTGCATGATCGGCTACTTCGACGATGGAAGCACTGAGAGCCACCGCTACTACCTTGCTCGCCGGACCACCCTAGAGATGCTCCGGGACAGAGGATACTCCATCCCTTCCTCTGAAATCGATCTCTCTCTTTCCGATTTCAGAGCCACTTACACTCAGTTTCCCGACGTTGACCGCCTCCGATTCTCCGCCACTCATATCTCTGACCCTTCCAAGAGGATTTTAGTTGTTTTCTGTGGTCCGACGATTGTCAAACTTAATGTGATCCGGGGCATCGTGGCTCAGATTGCCAATAGAGACACTTTAACTGGGCTGATATTGATATTGCAGAGTCAAATCACTAGCCAGGCCTTGAAATTAGTGAATGATATTAAACTCAAGGTTGAAATATTTCAGATCACAGACTTGCTTGTTAATATCACAAAGCATGTATTGAAGCCAAAGCATGAAGTGCTGACTGATCGACAGAAGAAGAATCTCCTAAAGAAGTACAATTTAGAAGAAAAGCAGCTTCCACGCATTCTGCAAACAGATGCTGTCGCCAAATACTATGGACTGGAGAAGGGACAGGTAGTTAAGATTACCTATAGTGGTGAAGTCACTCAGATGCATGTCACCTATAGATGTGTTTGGTGA 711 0.4627 MEEVARLPEYEKQGEADEDERGHLGECMIGYFDDGSTESHRYYLARRTTLEMLRDRGYSIPSSEIDLSLSDFRATYTQFPDVDRLRFSATHISDPSKRILVVFCGPTIVKLNVIRGIVAQIANRDTLTGLILILQSQITSQALKLVNDIKLKVEIFQITDLLVNITKHVLKPKHEVLTDRQKKNLLKKYNLEEKQLPRILQTDAVAKYYGLEKGQVVKITYSGEVTQMHVTYRCVW* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1387 236 Gene3D - 33 160 IPR036710 GO:0003677|GO:0003899|GO:0006351
Aev06g1387 236 Gene3D - 161 236 IPR035913 -
Aev06g1387 236 SUPERFAMILY RPB5-like RNA polymerase subunit 161 236 IPR035913 -
Aev06g1387 236 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 16 236 IPR014381 -
Aev06g1387 236 PIRSF RPB5 31 236 IPR014381 -
Aev06g1387 236 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 37 164 IPR036710 GO:0003677|GO:0003899|GO:0006351
Aev06g1387 236 Pfam RNA polymerase Rpb5, N-terminal domain 37 120 IPR005571 GO:0003677|GO:0003899|GO:0006351
Aev06g1387 236 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 16 236 - -
Aev06g1387 236 Pfam RNA polymerase Rpb5, C-terminal domain 163 235 IPR000783 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1387 Aev-Chr6 9575794 9577889 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1387 K03013 - gmx:100306033 331.643