Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1376 ATGGCTCTAATGGCTTCAAAGACCAACACAAAAGCCCTTATTGCAAGGGCACTGTCCTTGTTCTCCTCCAATTGTAGGCCACTCCATCACATGGGTGCTGCCTCTAACACCACCCTTTGCAAATCTTCTTCTTACTCCTCTTCTTCTGCTGCTGCTGAAGCTATGGAGGAAGATTCAGAATCAGAAACAGAGACGAAATCTAGGACCATGTTGAAGGACTATGTAGATTACAGAAGGTCACTCTATGGCCAAATCACTCACAAGGCTCTCCTTGTTGATGCTGTTGGCACCCTTGTCCTCCCTTCTCAGCCCATGGCTCAGATATACAGGAATATTGGGGAGAAGTATGGGGTGGAGTACTCTGAGGATGAGATATTGTACAGATATAGAAGAGCTTATGGTCAGCCATGGGGTAAATCTCGTCTCAGATATGTTAACGATGGTAAGCCGTTTTGGCAATACATAGTTAGTTATTCAACCGGCTGTTCAGATTCTCAGTACTTTGAAGAACTGTATAACTACTATACGACAGAAAAGGCATGGCATCTCTGTGATCCTCAAGCAGAAGAAGTGTTCAAAGCTCTTAGAAGTTCAGGTGTCAAGTTGGCCATTGTCTCAAATTTCGACACTCGACTAAGACCCCTCCTGCGGGCATTAAATTGTGATAACTGGTTTGATGCCGTAGCAGTATCAGCTGAGGTTGAAGCAGAGAAGCCAAATCCAACTATATTTCTTAAAGCATGTGAGCTGTTGGATGTAAAACCTGAGGAAGCTGTTCATGTCGGGGATGATCGAAGAAACGATATATGGGGTGCCAGAGATGCAGGCTGTGATGCCTGGCTTTGGGGAAGTGATGTTCACTCCTTCAAGGAGGTAGCTGAGAGGATTGGAGTGCAGGTCTGA 903 0.454 MALMASKTNTKALIARALSLFSSNCRPLHHMGAASNTTLCKSSSYSSSSAAAEAMEEDSESETETKSRTMLKDYVDYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRNIGEKYGVEYSEDEILYRYRRAYGQPWGKSRLRYVNDGKPFWQYIVSYSTGCSDSQYFEELYNYYTTEKAWHLCDPQAEEVFKALRSSGVKLAIVSNFDTRLRPLLRALNCDNWFDAVAVSAEVEAEKPNPTIFLKACELLDVKPEEAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKEVAERIGVQV* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1376 300 Gene3D - 92 284 IPR023214 -
Aev06g1376 300 PANTHER - 42 300 - -
Aev06g1376 300 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 88 281 IPR011949 -
Aev06g1376 300 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 88 282 - -
Aev06g1376 300 SUPERFAMILY HAD-like 88 290 IPR036412 -
Aev06g1376 300 Pfam Haloacid dehalogenase-like hydrolase 96 279 IPR041492 -
Aev06g1376 300 SFLD Haloacid Dehalogenase 88 282 - -
Aev06g1376 300 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 87 98 IPR006439 -
Aev06g1376 300 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 225 241 IPR006439 -
Aev06g1376 300 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 243 263 IPR006439 -
Aev06g1376 300 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 195 208 IPR006439 -
Aev06g1376 300 Gene3D - 103 176 IPR044924 -
Aev06g1376 300 CDD HAD_dREG-2_like 188 299 - -
Aev06g1376 300 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 187 276 IPR006439 -
Aev06g1376 300 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 42 300 - -
Aev06g1376 300 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 177 278 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1376 Aev-Chr6 9454734 9457564 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1376 - - gmx:100789672 448.358