Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1351 ATGCCATTTCTAACTCGTCTCCTTCACTTCACAAGACCTTTCTCTTCTTCTCTTCTCTCCACCTCGCGCCAGAATGGAGGTAGAGAAATATTGCCCAGGATTGCCATGAACATGTGCTCGCTTTCTTCAGCTGTTTCAGCTGAAGCATCAGATTTAGAATGTGAAGCAATCCATGATGATGTCAATGCAACAGAGAAAGATGATGCACTTCGCTTGGCTGTCTCACAGCTTGCTAGTGACTTTAGCAAGGAGTCAATGCTATCTCTGTGGAAGTTTTTTGGCGTACGACGTGCTCGTGTGATATCTACAGGCTCCTTGAAGCTTGACTTAGCTCTTGGAATTGGAGGATTACCAAAGGGTAGGATTGTCGAAATTTATGGACGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTAATTAAAGAAGCTCAAAAGCTAGGAGGGTATTGTGCATATCTTGATGCAGAAAATGCATTGGATCCTTCACTCGTGGAATCAATAGGTGTAAATACTGAAAACCTTCTTGTCTCTCATCCAGACTCTGCTGAAAACTTGTTGAGCATGGTTGACACACTAACAAAAAGTGGAGCTGTAGACGTGATTGTGGTTGATAGTGTTGCGGCCCTTGTCCCCAAATGCGAACTTGATCAGTTAGGTATTAGCACTAAACAAGATTTCCAATCGCGACTGATGACTCAAGCGCTGCGGAAAATTCAGTATTCATTATCTCACTCCCAAACTCTAATTATTTTTATTAATCAGATTAGATTTAGTCCGAAATCAGTCATGGGATGTGGACCTGTGGAAGAGGTGACTTGTGGTGGAAATGCTTTGAGATTCTATGCGGCTGTTCGTTTGAGACTTTCGAGAATGGGATTGATCAAAACTGAGGATCAGGTAGAGGGACTTATGGTCTCTGTGCAAGTGATAAAAAACAAACTAGCACCAGCAGCACTGAAAAAAGCCGAACTAGGGATCAAGTTTGGAAGAGGCTTTTGCCATGAAGTAGAGGTATTAGATTTGGCTTGTGAACATGGAATCGTTGTAAAAGATGAGGGAATCTACTTTTTAGAAGGGAAGAGTTTTGATACTAGAGAAGCAGCAGAACTGTATTTGGCTAAAAATGATGGGGTCTGTGACAAGTTGGCAATGGACTTGAAAAAGCTTTATTTTTAA 1179 0.4198 MPFLTRLLHFTRPFSSSLLSTSRQNGGREILPRIAMNMCSLSSAVSAEASDLECEAIHDDVNATEKDDALRLAVSQLASDFSKESMLSLWKFFGVRRARVISTGSLKLDLALGIGGLPKGRIVEIYGREAAGKTTLALQVIKEAQKLGGYCAYLDAENALDPSLVESIGVNTENLLVSHPDSAENLLSMVDTLTKSGAVDVIVVDSVAALVPKCELDQLGISTKQDFQSRLMTQALRKIQYSLSHSQTLIIFINQIRFSPKSVMGCGPVEEVTCGGNALRFYAAVRLRLSRMGLIKTEDQVEGLMVSVQVIKNKLAPAALKKAELGIKFGRGFCHEVEVLDLACEHGIVVKDEGIYFLEGKSFDTREAAELYLAKNDGVCDKLAMDLKKLYF* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1351 392 ProSiteProfiles RecA family profile 1. 97 256 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Aev06g1351 392 ProSiteProfiles RecA family profile 2. 261 338 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Aev06g1351 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 319 IPR027417 -
Aev06g1351 392 ProSitePatterns recA signature. 278 286 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Aev06g1351 392 Gene3D - 96 390 IPR027417 -
Aev06g1351 392 Pfam recA bacterial DNA recombination protein 69 333 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev06g1351 392 PRINTS RecA protein signature 189 218 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev06g1351 392 PRINTS RecA protein signature 309 338 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev06g1351 392 PRINTS RecA protein signature 275 303 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev06g1351 392 PRINTS RecA protein signature 227 256 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev06g1351 392 PRINTS RecA protein signature 155 184 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev06g1351 392 PANTHER DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL 19 392 - -
Aev06g1351 392 PANTHER RECA 19 392 IPR013765 GO:0003697|GO:0005524|GO:0006281
Aev06g1351 392 SMART AAA_5 119 293 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1351 Aev-Chr6 9254290 9257821 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1351 - - aip:107645515 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1351 06 9254290 9257821 Aev06g1351 06 9254290 9257821 ECH