Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1330 ATGGTTTGGTGTTTGCTTCGGGTTCCGAGCCTCAAGTATGGAAACCGTAACGTTACATTTGTTGATTTTGAATTCAAATCGGTAGGCCACGTTTGTGGGGTCAGAGGAGAGAAGTGTTCTGTGTCGTTCGTGTTGCATACTGAGTCAACTGATCCAACGGTAAGGATTTGTCTGATTGGGAAAATAGTTGAAATACTGAAAATCAGGCTTAAGCAGCCCAAATTCGAAACCACCACTTCCACCTTCACACAATCGTCCCTTCCCTTCTTCCTTCTTTCTTCCGAGCTTCCTGAGAAAAACGGCGGCACAGAAATGGCGGGGGTGAAGCGGTTATTGAAGAACAGTTTAGGAGAGATGGGATTCAATTCCGGCGGAGGAGCCATAAACTGGTTCCCGGGACACATGGCAGCCGCCACTCGCGCCATCCGTAACCGCCTCAAGCTTTCCGACCTCGTCATCGAAGTCCGCGACTCACGCATTCCTCTCTCCTCCGCCAACCTCGACCTCCAGCCTCACCTCTCCTGTAAACGACGCGTCGTCGCACTCAACAAGAAAGACCTCGCCAACCCCAACATCATGCACAAATGGGTGGATTATTTTGAGAAGTGCAAGCAAGATTGCATTCCGATAAATGCGCATAGCAAGAGTTCAGTGAAGAAGCTTCTGGAACTTGTGGAGTTGAAGCTGAAGGAAGTGATTTCCAGGGAGCCTACGCTGCTGGTTATGGTGGTTGGTGTTCCTAATGTTGGCAAATCTGCTCTCATTAACTCCATTCATCAAATTGCTCAGTCTCGCTTCCCTGTGCAGGAGAAGACGAAGCGAGCTGCTGTGGGTCCATTACCTGGTGTTACTCAAGACATTGCTGGATTCAAGATTGCAAATAAACCCAGCATATATGTCCTGGATACACCAGGGGTGTTGGTTCCAAGTATCTCAGACATAGAGACAGGGTTAAAGCTGGCTCTTGCAGGATCTGTTAAAGATTCAGTGGTGGGTGAGGAGCGTATCGCTCAGTACTTACTGGCAGTTCTGAATACGCGGGGCACTGCACTTCACTGGAAGCACCTAAGTAACAGGCGAATGGATGGTATCAAATATGATGCAGAGGAAAAACCTGACTATGATCTGAAAAATCTAAAGAGGAGAAAAGTTCTACCAAATAGATCTGACTTGGTATATGTTGAGGACCTTGTAATGGAAGTTCAGCGGGCACTCTACTCGACCCTAGCAGAGTTCAATGGCGACGTAGAAGATGAGAATGACTTAGAGGGCCTCATAGATCTGCAGTTTGGTGCACTGCAGAAGGCAATGAAAATCCCTCACAAGGCATCAGAAGCAAGGTTAATGGTATCCAAGAAGCTTCTTACTTTATTCAGAGCTGGTAAACTTGGACCTTTCATTCTTGATGATGTCCCTGATGTCATGCCTGTATCATAA 1437 0.4732 MVWCLLRVPSLKYGNRNVTFVDFEFKSVGHVCGVRGEKCSVSFVLHTESTDPTVRICLIGKIVEILKIRLKQPKFETTTSTFTQSSLPFFLLSSELPEKNGGTEMAGVKRLLKNSLGEMGFNSGGGAINWFPGHMAAATRAIRNRLKLSDLVIEVRDSRIPLSSANLDLQPHLSCKRRVVALNKKDLANPNIMHKWVDYFEKCKQDCIPINAHSKSSVKKLLELVELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIAQSRFPVQEKTKRAAVGPLPGVTQDIAGFKIANKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTRGTALHWKHLSNRRMDGIKYDAEEKPDYDLKNLKRRKVLPNRSDLVYVEDLVMEVQRALYSTLAEFNGDVEDENDLEGLIDLQFGALQKAMKIPHKASEARLMVSKKLLTLFRAGKLGPFILDDVPDVMPVS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1330 478 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 119 474 - -
Aev06g1330 478 CDD YlqF 130 307 - -
Aev06g1330 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 321 IPR027417 -
Aev06g1330 478 PANTHER SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE 119 474 - -
Aev06g1330 478 Gene3D - 128 307 IPR027417 -
Aev06g1330 478 Pfam 50S ribosome-binding GTPase 241 347 IPR006073 GO:0005525
Aev06g1330 478 Gene3D - 312 462 IPR023179 -
Aev06g1330 478 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 139 309 IPR030378 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1330 Aev-Chr6 9027827 9032383 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1330 K19828 - gmx:100801130 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1330 06 9027827 9032383 Aev06g1330 06 9027827 9032383 ECH