Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1294 ATGTATGCGAAATGTGGGCAAATTCGGTGTGCGAGGAAGGTGTTTGATGAAATGCCCGAAAGGAATGTGGTGTCTTGGAGTGGGATGATATATGGGTATGCTCAGATGGGTGAGGATGAGGAGGCTCTGGGGTTGTTTAAGACGGTGATGGGTGAGGGAGATGTTGGAATTAATGATTTTACATTGTCTAGTGTTTTGAGGGTTTGTGGTGGCTCTACCCTGCTTGAGCTGGGGAAGCAGGTACATGGTTTGTGCTTCAAGACGAGCTTTGATTCGTCATGTTTTGTGGGGAGTTCCTTGGTTTCGTTGTACTCCAAGTGCGGGGAGGTTGAAGGAGCATACAAGGTTTTTGAGGAGGTTAAGGATAGGAACCTTGGAATGTGGAATGCTATGATGATTGCTTGTGCTCAACACGCTCATACTAGTAGGACCTTTGAGCTGTTTAAGGAGATGGAGAGTGTCAGGATGAAGCCTAATTTCATCACCTTTCTATGCGTGCTCTACGCCTGCAGCCACGCAGGGTTAGTGGAGAAGGGGCAGCATTACTTTGAGATTATGAAAGGCTATGGTATTGAACCGGGGGCGCAGCATTATGCCTCATTTGTGGACTTGCTTGGTCGTGCCGGGAAGTTGCAAGATGCAGTTCAGGTAATCAAAGAGATGCCAATGGAACCAACAGAATCTGTTTGGGGAGCTTTGTTAACAGGGTGTAGGTTACACGGAAACACTGAACTGGCATCCTATGTGGCCGACAGAGTTTTCGAGTCCGGTCCTGTTAGCTCAGGCCTTCATGTCTTGCTGTCTAACGCTTATGCTGCTGCCGGGAGATGGGAGGAAGCAGCGAGGGCGAGGAAGATGCTGAGGGACCAAGGAATAAAGAAGGAAACAGGGTTGAGTTGGGTGGAGGAAGGGAATAGAATCCACACATTTGCTGCTGGGGACAGGTCTCATGCCAAAACCATGGAAATTTACAAGAAGTTGGAGGAGTTAGGCGAAGAAATGGAGAAAGCTGGTTATGTTGCAGACACGTCTTATGTGTTGAAAGAGGTGGGTGGTGAAGAGAAGAATGAGACTATTAGATATCACAGTGAAAGGTTAGCCATAGCATTTGGCCTTATCACTTTCCCTAAGGAAAGACCAATCAGAGTGATGAAGAACTTGCGCGTCTGTGGCGATTGCCACAATGCGATCAAGTTTATTAGCAAGTGCAGTGAAAGGGTTATCATTGTGAGGGACAATAACAGGTTTCACCGGTTTGAGGATGGAAAGTGCACTTGTGGAGATTACTGGTAA 1293 0.4725 MYAKCGQIRCARKVFDEMPERNVVSWSGMIYGYAQMGEDEEALGLFKTVMGEGDVGINDFTLSSVLRVCGGSTLLELGKQVHGLCFKTSFDSSCFVGSSLVSLYSKCGEVEGAYKVFEEVKDRNLGMWNAMMIACAQHAHTSRTFELFKEMESVRMKPNFITFLCVLYACSHAGLVEKGQHYFEIMKGYGIEPGAQHYASFVDLLGRAGKLQDAVQVIKEMPMEPTESVWGALLTGCRLHGNTELASYVADRVFESGPVSSGLHVLLSNAYAAAGRWEEAARARKMLRDQGIKKETGLSWVEEGNRIHTFAAGDRSHAKTMEIYKKLEELGEEMEKAGYVADTSYVLKEVGGEEKNETIRYHSERLAIAFGLITFPKERPIRVMKNLRVCGDCHNAIKFISKCSERVIIVRDNNRFHRFEDGKCTCGDYW* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1294 430 TIGRFAM PPR: pentatricopeptide repeat domain 127 159 IPR002885 -
Aev06g1294 430 Pfam Pentatricopeptide repeat domain 124 170 IPR002885 -
Aev06g1294 430 Pfam E motif 240 302 IPR046848 -
Aev06g1294 430 Pfam DYW family of nucleic acid deaminases 338 430 IPR032867 GO:0008270
Aev06g1294 430 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 124 158 IPR002885 -
Aev06g1294 430 Gene3D Tetratricopeptide repeat domain 1 77 IPR011990 GO:0005515
Aev06g1294 430 PANTHER OS01G0913400 PROTEIN-RELATED 1 374 - -
Aev06g1294 430 Pfam PPR repeat 24 48 IPR002885 -
Aev06g1294 430 Pfam PPR repeat 2 23 IPR002885 -
Aev06g1294 430 Pfam PPR repeat 198 222 IPR002885 -
Aev06g1294 430 Pfam E+ motif 307 334 IPR046849 -
Aev06g1294 430 Gene3D Tetratricopeptide repeat domain 97 358 IPR011990 GO:0005515
Aev06g1294 430 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 22 56 IPR002885 -
Aev06g1294 430 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 159 193 IPR002885 -
Aev06g1294 430 PANTHER BNAA10G28390D PROTEIN 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1294 Aev-Chr6 8635598 8636890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1294 1 430 Glycoside Hydrolase AT3G49170 39.770 3.13e-114 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1294 - - lang:109356914 756.903