Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1273 ATGAATCTCATAGTAAGGCAAGGGCGAGCGATTCTCAAAGTCCATAACCCAGAAATTGTCAGGCCACAACTCTTCTTCCTCTTCCTCTTCCTCTTCACCCAAACACTCCTAGCCACGTCACACCCTCCGATTCCTCTTCCCATCACCCTCTCTGTCGCCGACTACGGAGCCGCCGGCGATGGCCTCCGCTATGACACGGCGGCCATCCAGTCCGCAATCGACGCCTGCCCCGACGGCGGCCCCTGCCGCGTCACCTTCCCGGCGCCGGGAAGGTACCTGACGGCCACCGTGTTCCTGAAATCCGGCGTGGAGCTCAACGTAGAGCCCGGCGCCGCCGTCGTTGGCGGCACGAGGCTGGAGGACTACCCGGAGGATCCATCGCGGTGGTACGTGGTGATGGCGGAGAACGTGAAGGACGTCGGGATCGGCGGCGGCGGAGTGGTGGATGGACAGGCGATGAAGTTCGTAGTGAGAGAGGATCCAAGGAAGAACGTGATGGTGAGCTGGAATCAGACAGGGGCGTGTTTGGGAGACGAATGCAGACCCAGGCTGATCGGATTCATAGGTTGCAACAACATTAGGGTTTCCAACATTACTCTCAATCAACCTGCTTATTGGTGCTTACACATAGTTAGGAGTAACAACACAAGCATTGAGGATGTTTCAATTTATGGGGACTTCAATATTCCAAACAATGACGGTATTGACATAGAGGACTCTAACAACACATTGATCACACGGTGCCACATTGATACAGGGGATGATGCAATCTGTCCAAAGTCATCCACAGGCCCCGTTTACAACCTCACTGCCACCAATTGTTGGATTCGATCCAAATCTTCCGCAATCAAACTTGGCAGTTCTAGTTGGTTTGATTTCAGGAATTTTTTGTTTGACAATATCACAATTGTGGATTCTCATAGAGGACTTGCATTCCAGATCCGTGATGGAGGAAATGTAAGTGACATTGTCTTCTCAAACATAGAAATCAGCACAAGATACTATGATCCGTTATGGTGGGGGAGAGCAGAGCCTATCTATGTCACGACTTGCCCGCGACACCCAACCTCAAAGGAGGCATCAATCTCAAACATACTTTTCACCAACATCACTGCATATTCTGAAAATGGCATCTTCCTCTCAGGTTCAAAGAGAGGGTTGCTAAGGAATTTGAGATTCATTAACATGAACGTCACTTATAGAAGGTTCACCAGTTATGTTGGTGGGTTATTGGACTATAGGCCAGGGTGCCGAGAATTGGTGAAACACGGCACAGCAGGCATGATCATGGAGCACATAGAAGGTCTTGAGGTTAAGAACGTAGAGATGAGGTGGTCCAATGAGGAACTCGAGGAGTGGAATAATTCTTTGGAGTTCAAACCATCTACTGTTAATAACATCACTTTCCTTAATTTTAATTCTGGTTTGTACACATAA 1437 0.4927 MNLIVRQGRAILKVHNPEIVRPQLFFLFLFLFTQTLLATSHPPIPLPITLSVADYGAAGDGLRYDTAAIQSAIDACPDGGPCRVTFPAPGRYLTATVFLKSGVELNVEPGAAVVGGTRLEDYPEDPSRWYVVMAENVKDVGIGGGGVVDGQAMKFVVREDPRKNVMVSWNQTGACLGDECRPRLIGFIGCNNIRVSNITLNQPAYWCLHIVRSNNTSIEDVSIYGDFNIPNNDGIDIEDSNNTLITRCHIDTGDDAICPKSSTGPVYNLTATNCWIRSKSSAIKLGSSSWFDFRNFLFDNITIVDSHRGLAFQIRDGGNVSDIVFSNIEISTRYYDPLWWGRAEPIYVTTCPRHPTSKEASISNILFTNITAYSENGIFLSGSKRGLLRNLRFINMNVTYRRFTSYVGGLLDYRPGCRELVKHGTAGMIMEHIEGLEVKNVEMRWSNEELEEWNNSLEFKPSTVNNITFLNFNSGLYT* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1273 478 Pfam Glycosyl hydrolases family 28 83 400 IPR000743 GO:0004650|GO:0005975
Aev06g1273 478 Gene3D - 32 408 IPR012334 -
Aev06g1273 478 SUPERFAMILY Pectin lyase-like 27 408 IPR011050 -
Aev06g1273 478 PANTHER PECTIN LYASE-RELATED 45 476 - -
Aev06g1273 478 SMART pbh1 190 212 IPR006626 -
Aev06g1273 478 SMART pbh1 357 382 IPR006626 -
Aev06g1273 478 SMART pbh1 266 287 IPR006626 -
Aev06g1273 478 SMART pbh1 320 342 IPR006626 -
Aev06g1273 478 SMART pbh1 213 239 IPR006626 -
Aev06g1273 478 SMART pbh1 240 261 IPR006626 -
Aev06g1273 478 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 45 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1273 Aev-Chr6 8474556 8477054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1273 34 478 Glycoside Hydrolase AT3G57790 65.502 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1273 - - gmx:100794954 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1273 06 8474556 8477054 Aev06g1273 06 8474556 8477054 ECH