Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1267 ATGTCGAATTTGTACGGGGATTACAACCAGAAGATTGATTACGTATTCAAGGTGGTGTTGATCGGTGATTCCGCTGTTGGCAAGACGCAGCTGCTAGCACGTTTCGCTAGGAACGAATTCAGCGTGGATTCGAAGGCTACCATTGGTGTTGAATTTCAGACAAAAACTCTTATCATTGATAACAAGACCGTCAAGGCTCAGATATGGGACACCGCTGGCCAAGAAAGGTACAGGGCAGTAACTAGTGCATACTATCGAGGTGCTGTTGGAGCAATGCTAGTTTATGACATGACTAAGCGTCAATCTTTCGACCACATGGCAAGGTGGTTGGAAGAATTGAGAGGCCATGCCGACAAAAACATAGTTATAATGCTGATTGGTAACAAGTGTGATCTGGCAACTCTTAGAGCAGTGCCAACAGAGGATGCAGAGGAGTTTGCACAGAGAGAGAACTTGTTCTTTATGGAGACATCAGCACTTGAGTCCACTAATGTTGAGACTTGCTTTCTGACAATCTTAACTGAGATATACAGAATCAATGCCAAGAAATCACTTACTGCCATGCCCGAAGCAAGAGACCGTCGCTCCAGCCCGGTTGATGTAGCCGCCGTTTTTGCCCGCCGGAGGGCTTCCATCTTCGCCGTCTCCGACGACGGTCTCGACACCCTCGTTTTCGGATCCACTCCGAGGCAACCAGCCTCGCCACAAGCCCCAGCCGGGTCGGCACAAACAGGGATTGGGTTCGGAACTCCAAGAAGCGCTTCGGGTCGGGGGCGGGCTGGTCTTCGCTTATACGGGGTGGAGAATAACATCCCCTTGGGGACTGCTAGGCGAGGAAGGGCTCGTGGCGTTCTTCCTTCTTGGTACCCCAGAACCCCTCTTAGGGACATCACTGCTGTTGTGCGGGCAATTGAAAGGAGGAGAGCTCGTTTGGGAGAGAACGAAGGCCAGCAAACTGCGACTCCATTCCCTGTGGATCGTGTGCTTCCTGATCCTTCTGTGTCCACGGATGGTGCTTCTTTGCTCACTCCCGAGCCATCAACTGGTGTCAAGCTCCGAACACCAGGTGGCAAGGTCCCCAAGATTCTGCTCGAGATCGCGAACCAGGCCGAAGGTGAGTCAGAATTAACCCCCCAGAAGAAACTGCTCAATTCCATTGACAATGTTGAGAAGGTTGTGAGAGAGGAGCTACAGAGACTTAAGAGAACACCAAGCGCCAAGAAAGCAGAAAGGGAGAAAAGGGTTCGTACATTGATGTCCATGAGGTGA 1269 0.5106 MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLIIDNKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLATLRAVPTEDAEEFAQRENLFFMETSALESTNVETCFLTILTEIYRINAKKSLTAMPEARDRRSSPVDVAAVFARRRASIFAVSDDGLDTLVFGSTPRQPASPQAPAGSAQTGIGFGTPRSASGRGRAGLRLYGVENNIPLGTARRGRARGVLPSWYPRTPLRDITAVVRAIERRRARLGENEGQQTATPFPVDRVLPDPSVSTDGASLLTPEPSTGVKLRTPGGKVPKILLEIANQAEGESELTPQKKLLNSIDNVEKVVREELQRLKRTPSAKKAEREKRVRTLMSMR* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1267 422 PANTHER BNAA05G26830D PROTEIN 1 197 - -
Aev06g1267 422 SMART ran_sub_2 21 223 - -
Aev06g1267 422 SMART arf_sub_2 1 181 - -
Aev06g1267 422 Pfam Ras family 17 177 IPR001806 GO:0003924|GO:0005525
Aev06g1267 422 MobiDBLite consensus disorder prediction 401 422 - -
Aev06g1267 422 ProSiteProfiles small GTPase Rab1 family profile. 11 216 - -
Aev06g1267 422 CDD Rab11_like 13 177 - -
Aev06g1267 422 MobiDBLite consensus disorder prediction 228 250 - -
Aev06g1267 422 TIGRFAM small_GTP: small GTP-binding protein domain 15 171 IPR005225 GO:0005525
Aev06g1267 422 MobiDBLite consensus disorder prediction 228 257 - -
Aev06g1267 422 SMART ras_sub_4 13 179 - -
Aev06g1267 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 184 IPR027417 -
Aev06g1267 422 SMART rab_sub_5 16 179 - -
Aev06g1267 422 PRINTS Transforming protein P21 ras signature 57 79 - -
Aev06g1267 422 PRINTS Transforming protein P21 ras signature 119 132 - -
Aev06g1267 422 PRINTS Transforming protein P21 ras signature 154 176 - -
Aev06g1267 422 PRINTS Transforming protein P21 ras signature 16 37 - -
Aev06g1267 422 PRINTS Transforming protein P21 ras signature 39 55 - -
Aev06g1267 422 ProSiteProfiles small GTPase Ras family profile. 10 224 IPR001806 GO:0003924|GO:0005525
Aev06g1267 422 PANTHER - 1 197 - -
Aev06g1267 422 ProSiteProfiles small GTPase Rho family profile. 9 181 - -
Aev06g1267 422 Gene3D - 8 201 IPR027417 -
Aev06g1267 422 SMART rho_sub_3 18 175 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1267 Aev-Chr6 8420944 8426577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1267 K07904 - ath:AT3G12160 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1267 06 8420944 8426577 Aev06g1267 06 8420944 8426577 ECH