Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1193 ATGAAGCGAGTGTGGAGATTCTCCTCTGATGCAGCAGCGCAAGCCGAGCTTTTCTGCTTCCACTCCCATGGAATCCCTCTCCCCAAACCCATCACCGACACCACCGCCGCCTCCCTCAGAGCTTCACCTTTCTGCATCTTCACGCGCCAAAGCTGCACCCTCCCTCCTCCTCGCATGTTCCCCGACGTCGTTTCCTTATTCACCGCCAAAGCTTGGATCCCGCCACAAGAGGATCGCTGCAACAAAGCTTCGATTTTGATGAACCAGCTGCTTCATGAAGCATCGGACTCTGCCAGGGTCCTCCAGATCCTCGACGATAACTTTGAGTCCTTGATTGTGTCTCACACCTCTGGATCCGTGTTTCTCGAACTAATGAACCGGTTAGATTCAAAGCCTTCATTGGCCCTTGAGGTGTTTAATTGGAGGAGAAAGGTTACCGGTGCCATCACTGTAATGAGTGCATATGAGTATTCTAAGGGGATAAAAGCTGCAGGTAGACAACGCAATATTGATCTTGCTGTTGAGCTCTTTAAGGAGGCTGAACGCAAGGGTATTAAAACTACCAGCACTTACAATGCACTGATGGGTGCTTACATGTACAATGGTCTCGCCGATAGGTGTCAATCATTGTTTTGTGAAATGAAGAAGGAATCGAGGTGCACTCCTTCCATTACCACCTACAATACTCTCATATCTGTTTTTGGTCGTCTGTTGCTGATTGATCACATGGAAGCAACCTACCAGGAGATAAACAAGTTAGATCTCCCCCTTGATATAAAAACTTATAATAATTTGATTGCCGGATATATCGCGGCTTGGATGTGGGATGATATGGAAAAGGTTTTCCAAATGTTGAAGACAGGACATGTCATGCCTAACTTAACTACGTATCTGCTAATGCTTCGAGGCTATGCACTTTCAGGTAATCTGGAGAAGATGGAAGAGACGTATTCTTGGATAAGTGATAATGTAAATGAAAAACATATTGAGTTGATCAGGTGTATGATATGTGCGTATTGTAGAAGTTCTGATGCAGATAGAATTAAGAAGATAGAGTTATTGTTGAAGTTTATTCCGCAAGAAGAGTACAGACCCTGGTTGAATGTGCTGTTGATTAGGCTCTATGCCCAGGAGGACAGGTTAGAAGAAATGGAGAATGCGATAAATGAGGCATTTGAGCGCAGAACCTCTGTAACCACCATAAGTATTATGAAATGCATAATTACAACGTATTATCGGTCCAATGCAGTTGAGAAGCTCGAAACGTTTGTGAAACGTGCCGAATGTGCTGGGTGGAAGATCTGCCGCAGCTTATACCATTGTAAGTTGGTCATGTATGGATCACAGAAGCGCCTTGAGGAAATGAATAGTGTCCTTAATGAGATGGAATATGTTAATCTCTGTTGCACAAAGAAAACGCTGTGGATAATGTACAGAGCGTACCTGACCTGTGGTAAGAGATCCATGGTTTTGAAAATATTGGGACAAATGTTCAAGCATGGTCACGAAGTCCCCTTGGAAGCATTTCCATCATAA 1536 0.4427 MKRVWRFSSDAAAQAELFCFHSHGIPLPKPITDTTAASLRASPFCIFTRQSCTLPPPRMFPDVVSLFTAKAWIPPQEDRCNKASILMNQLLHEASDSARVLQILDDNFESLIVSHTSGSVFLELMNRLDSKPSLALEVFNWRRKVTGAITVMSAYEYSKGIKAAGRQRNIDLAVELFKEAERKGIKTTSTYNALMGAYMYNGLADRCQSLFCEMKKESRCTPSITTYNTLISVFGRLLLIDHMEATYQEINKLDLPLDIKTYNNLIAGYIAAWMWDDMEKVFQMLKTGHVMPNLTTYLLMLRGYALSGNLEKMEETYSWISDNVNEKHIELIRCMICAYCRSSDADRIKKIELLLKFIPQEEYRPWLNVLLIRLYAQEDRLEEMENAINEAFERRTSVTTISIMKCIITTYYRSNAVEKLETFVKRAECAGWKICRSLYHCKLVMYGSQKRLEEMNSVLNEMEYVNLCCTKKTLWIMYRAYLTCGKRSMVLKILGQMFKHGHEVPLEAFPS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1193 511 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 187 217 IPR002885 -
Aev06g1193 511 Gene3D Tetratricopeptide repeat domain 371 509 IPR011990 GO:0005515
Aev06g1193 511 PANTHER OS05G0407900 PROTEIN 1 510 - -
Aev06g1193 511 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 258 292 IPR002885 -
Aev06g1193 511 Pfam Pentatricopeptide repeat domain 248 301 IPR002885 -
Aev06g1193 511 Pfam Pentatricopeptide repeat domain 176 235 IPR002885 -
Aev06g1193 511 PANTHER EXPRESSED PROTEIN 1 510 IPR044179 GO:0003729
Aev06g1193 511 Coils Coil 367 394 - -
Aev06g1193 511 Gene3D Tetratricopeptide repeat domain 253 323 IPR011990 GO:0005515
Aev06g1193 511 Gene3D Tetratricopeptide repeat domain 82 252 IPR011990 GO:0005515
Aev06g1193 511 TIGRFAM PPR: pentatricopeptide repeat domain 190 223 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1193 157 383 Miscellaneous Gene Families AT4G11690 21.739 9.92e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1193 - - gmx:100816768 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1193 06 7943068 7944842 Aev06g1193 06 7943068 7944842 ECH