Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1170 ATGGCGAATCTTATGCAATTATTCTCGGTGATCCCTTGCAATCCCTATAAATGCCGAAAGCCCAAATGGTCTTCCTTTCACAGATCCCTTATTGAAAGGAAAAGCCTTCTTTTTTTTGGAGGATTGCAGAACCCCATTAGCCCCTTTTCCCAGAATCCCCCCTCCCAATTGCGCGCCACGTCACGGTTGTCCGTTGAGCCGGAACTGAATGCCGCCGTTTCCAAATCCGAGGATCTGAAGAGGGCGCTGAGTTATTTGTTCAGGACAGAGATCGGCGGCGGTTTGGTAAGAGTTTTTGTTACGAAGAATAAAAACAATGGTAGGTATTCTGTCTTAATTGAAGTTTCTTCCTTGGACCTAGGTAGTAGTGGCCAAGGTGAGAGAAGGCTTGTATTGTGTTGGGGCTTGTATAGATCCGATTCGAAGAGTTTGAATGTGGATGCTGGGACAGGGATGAATCTGAGCCTGTTTGAGCAGAATTCTGGTGGGAAGAAGTATGTGCTTGAGTTGGAATTTAATGCTAAGCATGTTCCCTTGTACCTGTCATTTTACTTTAAATCATTGCTAGGTAGTGATGCTGATGAGTCTGGTGGATTGGAAATTAGGAGCCATAGGAGAACGAATTTTTGTGTGCCTGTTGGCTCTCTTCCGGGGTACCCGGCTCCTCTGGGTCTGTCTATTAGTCCTGATGGTTCCATGAACTTTGCCCTTCTCTCAAGGCATGCCGAGGATGTTGTTTTGTGCTTGTATGATAATACTGGTGCAGAGAAGCCTGCTCTAGAGCTTGATCTGGACCCTTATATCAATCGGTCAGGGGACATCTGGCATATCGCGCTTGAGAGTGCCTGGAATTTTGTGAGCTATGGTTATCGCTGCAGAGGAGAACAAGTAAGGAGAGAAAAGGGTGATGGATATGCTGAGCGTGTTCTTTTGGACCCCTATGCTAAGATTATTGGGAATTCTTTTCCTAATGGTCATGGATCAGTGAAGAGTCTTGCACTGTTGGGTAAGGAACCTAATTTTGATTGGGGCGATGATTATCATCCAAATCTGTCTATGGAAAAACTGGTGGTGTATAGATTGAATGTGAAGCGCTTCACGCAACACAAGTCCGGTGAACTTCCTAGCGATTTGGCTGGAACCTTTTCTGGTTTGGCTAATAAGGTGCAGCATTTTAAAGATCTTGGGGTGAATGCCATTTTGTTGGAGCCAGTTTTCACATTTGATGAGAAGAAGGGACCATATTTTCCTCGTCACTTCTTCTCCTTAATGCACATTTATGGACCATCCGGTGGTCCTGTATCTACTATCAACTCTATGAAGGAGATGGTTAAGACTATGCATGCCAATGGAATAGAAGTTCTCATGGAAGTTGTTTTCTCCCACACTGATGAGGATGGTGCTCTGCAAGGAATTGATGACTTATCTTACTATTATGCCAATGGAGCTGGTGATTTGAAGATACAGGGTGCTTTGAATTGTAACTTTCCTGTAGTGCAAAACTTGACTCTGGATAGCCTTCGGCATTGGGTAACTGAGTTTCGCATTGATGGCTTCTCTTTCGTAAATGCTTCACATCTGTTGAGGGGTTTTCATGGAGAGTACTTGTCTCGACCTCCGTTGATTGAAGCAATTGCTTTTGACCCGGTACTATGGAACACTAAAATCATTGCAGATGGTTGGGATCCCCATGGCATGGTAGTAAACACAACCCGCTTCCCCCATTGGATGAGATGGGCTGAAATAAACACAAACTTTTGTAATGACATGAGAAACTTTTTAAGGGGTGAGAGTCTTCTTAGTGACCTCGCAACAAGACTTTGTGGGAGTGGAGACATGTTTTCTGACGGGAGAGGACCTGCATTCTCTTTCAATTACATTGCCAGGAGTTTTGGACTTTCTCTTGTGGACTTGGTCAGCTTCAGCAGTGCTGAGCTAGCTGCAGAATTAAGTTGGAATTGTGGAGAAGAAGGTCCAACTAACAAAACCGGTGTCCTTGAAAGACGACTCAAACAAATCCGTAATTTCCTCTTCATCTTGTTTGTGTCATTAGGAGTGCCTGTTTTGAACATGGGAGATGAGTGTGGTCAGTCTTCTGGTGGTTCTCCTGCATACAGTGACATAAAACCTTTCAATTGGAGTGCTTTGGAATCAGGTTTCGGCAAACAAACCACACAGTTCATTTCCTACTTAAGCTCATTGAGAATGAGGCGAAGCGATCTTCTTCAGAGTAGGAGCTTCTTAAAAGAAGAGAACATCGAATGGCAAGGAAGCGATGGGACTCCACCAAGATGGGAGGATCCATCCTGCAAGTTCCTGGCCATGATTTTGAAGTCTGAAAAAATGGAACTCCCAGAGAGCCCTGTATCTTCTGATTTATCAGGGGATTTATTTGTTGCTTTCAATGCAGCTAATCATCCAGAAACTGTAGTTTTGCCCCTGCCTCCGGAAGGGAGGTCGTGGTACCGTTTGGTTGACACAGGTCTTCCATTTCCTGGATTTTTCTTGACCGGTGGCGACCCTGTGCCTGAGCAGACAACAGGGTTGTTTACTTATCAAATGAAGTCCCACAGCTGCACTTTATTTGAGGCAAGCAATAAAAGCAGTTAG 2610 0.4464 MANLMQLFSVIPCNPYKCRKPKWSSFHRSLIERKSLLFFGGLQNPISPFSQNPPSQLRATSRLSVEPELNAAVSKSEDLKRALSYLFRTEIGGGLVRVFVTKNKNNGRYSVLIEVSSLDLGSSGQGERRLVLCWGLYRSDSKSLNVDAGTGMNLSLFEQNSGGKKYVLELEFNAKHVPLYLSFYFKSLLGSDADESGGLEIRSHRRTNFCVPVGSLPGYPAPLGLSISPDGSMNFALLSRHAEDVVLCLYDNTGAEKPALELDLDPYINRSGDIWHIALESAWNFVSYGYRCRGEQVRREKGDGYAERVLLDPYAKIIGNSFPNGHGSVKSLALLGKEPNFDWGDDYHPNLSMEKLVVYRLNVKRFTQHKSGELPSDLAGTFSGLANKVQHFKDLGVNAILLEPVFTFDEKKGPYFPRHFFSLMHIYGPSGGPVSTINSMKEMVKTMHANGIEVLMEVVFSHTDEDGALQGIDDLSYYYANGAGDLKIQGALNCNFPVVQNLTLDSLRHWVTEFRIDGFSFVNASHLLRGFHGEYLSRPPLIEAIAFDPVLWNTKIIADGWDPHGMVVNTTRFPHWMRWAEINTNFCNDMRNFLRGESLLSDLATRLCGSGDMFSDGRGPAFSFNYIARSFGLSLVDLVSFSSAELAAELSWNCGEEGPTNKTGVLERRLKQIRNFLFILFVSLGVPVLNMGDECGQSSGGSPAYSDIKPFNWSALESGFGKQTTQFISYLSSLRMRRSDLLQSRSFLKEENIEWQGSDGTPPRWEDPSCKFLAMILKSEKMELPESPVSSDLSGDLFVAFNAANHPETVVLPLPPEGRSWYRLVDTGLPFPGFFLTGGDPVPEQTTGLFTYQMKSHSCTLFEASNKSS* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1170 869 SMART aamy 360 735 IPR006047 GO:0005975
Aev06g1170 869 SUPERFAMILY (Trans)glycosidases 339 739 IPR017853 -
Aev06g1170 869 SUPERFAMILY Glycosyl hydrolase domain 750 864 - -
Aev06g1170 869 Gene3D Glycosidases 337 750 - -
Aev06g1170 869 PANTHER GLYCOGEN DEBRANCHING ENZYME 58 867 - -
Aev06g1170 869 CDD E_set_GDE_Isoamylase_N 222 360 IPR044505 -
Aev06g1170 869 Pfam Alpha amylase, catalytic domain 380 466 IPR006047 GO:0005975
Aev06g1170 869 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 222 315 IPR004193 GO:0004553|GO:0005975
Aev06g1170 869 SUPERFAMILY E set domains 217 349 IPR014756 -
Aev06g1170 869 PANTHER ISOAMYLASE 2, CHLOROPLASTIC 58 867 - -
Aev06g1170 869 Gene3D Immunoglobulins 210 332 IPR013783 -
Aev06g1170 869 CDD AmyAc_plant_IsoA 352 743 IPR044096 GO:0019156|GO:0019252
Aev06g1170 869 Gene3D - 751 869 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1170 Aev-Chr6 7826685 7829294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1170 59 869 Glycoside Hydrolase AT1G03310 56.077 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1170 K01214 - gmx:100777953 1254.2