Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0786 ATGACTTCTCTTAGCAGAGAATTGGTGTTCCTCATACTACAATTTCTGGAGGAGGAAAAATTCAAAGAGTCGGTGCACAAGCTTGAGAAAGAATCAGGCTTTTTCTTCAACATGAAATACTTTGAGGAAAAAGTACAAGCAGGTGAATGGGAAGAAGTTGAGAAGTACTTGGCAGGGTTTACCAAAGTTGATGATAATAGATACTCCATGAAAATCTTCTTTGAAATCAGGAAGCAGAAATATCTTGAAGCCCTTGATAGGCAAGACAAGGCAAAGGCTGTTGAGATATTAGTGGGTGATTTAAAAGTATTCTCCACCTTCAATGAGGAACTATACAAAGAAATCACACAGCTGTTAACTCTCAATAATTTCAGGGAGAATGAGCAACTGTCAAAGTACGGCGACACTAAAACTGCTCGAGGGATTATGTTGATTGAGCTAAAAAAGCTGATAGAAGCAAATCCACTTTTCCGTGATAAGTTGATCTTCCCTACTCTTAAATCATCAAGATTGCGGACATTAATCAATCAAAGTCTAAACTGGCAGCACCAGCTTTGCAAAAACCCAAGGCCTAACCCAGATATAAAAACTTTATTCACTGATCATACATGTACTCCTCCTAATGGTCCTCTAGCACCTACACCTGTCAATCTTCCAGTTGCTGCAGTTGCAAAGCCCACTGCTTATACTTCACTTGGAGCTCATGGTCCCTTTCCACCTGCTGCAGCAACAGCTAATGCTAATGCCTTGGCTGGTTGGATGGCTAATGCCTCAGCTTCATCATCTGTCCAAGCAGCTGTTGTCACAGCATCAACCATGCCAGTCCCACAGAGTCAAGTGTCTATTTTGAAGCGTCCAATAACACCTCCAACAACTCGTGGCTTGGTTGATTATCCAAATGCTGATCATGAACAGCTAATGAAAAGACTTCGGCCTGCCCCTTCTTTAGAGGAGGTTTCCTATCCTTCAGCCCGACAAGCTTCTTGGTCATTGGATGATCTACCAAGATCAGTGGCTATGACTTTGCCTCAAGGGTCCTCTGTGACAAGCATGGATTTTCATCCTTCTCACCAAACCTTACTTCTTGTTGGATCTAATAATGGTGAAATTGCCCTTTGGGAACTTGCAATGCGAGATAGGTTGGTCTCAAAGCCATTCAAGATATGGGATATGTCAGCGTGCTCATTACCATTTCAGGCTGCTGCAGTCAAAGACGCACCTATATCTGTCAGTCGTGTCACATGGAGCCCTGATGGAAGTTTTGTGGGTGTTGCATTTACTAAACATTTGATTCACTTGTATGCCTACACTGGTTCAAATGAGCTAGCCCAGCGTAAAGAGGTTGATGCCCATATTGGTGGTGTTAATGACTTGGCATTTGCTCATCCAAATAAGCAACTCTGCATCGTGACTTGTGGAGACGATAAGTTGATTAAGGTGTGGGATTTAACTGGAAGAAGATTATTTAACTTTGAGGGGCATGAGGCACCTGTATATTCCATTTGTCCTCATCACAAGGAGAGCATTCAGTTCATATTTTCAACTGCCATCGATGGCAAAATAAAAGCCTGGTTATATGATAATATGGGTTCTAGGGTTGACTATGATGCTCCTGGTTACTGGTGTACTACAATGCTTTACAGTGCTGATGGGAGTAGATTGTTTTCTTGTGGGACTAGCAAAGATGGAGAGTCATTTCTTGTTGAATGGAATGAAAGTGAAGGAGCGATTAAGAGAACGTACAATGGTTTCAGAAAGAAATCTGCTGGTGTCGTGCAGTTTGACACAACCCAAAATCGCTTTTTGGCTGCTGGTGAAGATGGCCAGATCAAGTTTTGGGACATGGACAATATTAATCTACTAACAAGCACTGATGCGGAAGGTGGACTTCAGAACCTTCCACGCTTGCGATTCAACAAGGAAGGAAATCTTCTTGCTGTTACTACTGTGGACAATGGATTTAAAATTCTCGCCAATGCTAGTGGGCTCAGATCTTTAAGAACAATGGAAACTCAAGGTTTTGAAGCATTGAGGTCACCCATTGAATCTATCAAGGCATCTGGATCTTCTGCTGTTAATGTTAGTCCTGTCAACTGTAAAGTGGAAAGGAGCTCTCCTGTCAGGCCTTCTCCAATTCTTAACGGAGTTGATCCCATTGGTCGAAATGTGGAGAAACCAAGAAGTGGGGAAGATGCAACAGATAGAACTAAACCATGGCAGCTGTCTGAAATCGCAGATCCTGTCCAGTGTCGGTTAGTTACCATGCCTGACAGCACAGATTCGTCCAGCAAGGTTGTTCGTCTTCTATACACAAATTCTGGTGCTGGTCTTTTGGCACTTGGTTCAAATGGTGTTCAGAAGCTGTGGAAGTGGGTTCGCAGTGAACAAAATCCTAGTGGGAAGGCAACTGCTAGTGTTGTTCCACAACATTGGCAACCCAACAGTGGCCTTCTTATGACCAATGATATCTCAGGTGTCAATCTTGAAGAAGCAGTTCCTTGCATTGCCCTCTCAAAGAATGACTCGTATGTTATGTCTGCTTGTGGTGGAAAGGTTTCATTATTTAATATGATGACGTTCAAGGTAATGACAACGTTTATGCCACCACCTCCTGCATCCACCTATCTAGCTTTCCATCCTCAGGATAACAACATCATTGCCATTGGGATGGAGGACTCAACTATTCACATTTATAATGTCAGAGTTGATGAGGTGAAATCAAAACTGAAGGGTCACCAGAAGCGTATTACCGGTTTAGCCTTCTCAACCAATCTTAACATCCTTGTTTCATCTGGTGCTGATGCTCAACTTTGTGTGTGGAGCATTGATACGTGGGAGAAAAGAAAATCAATTCCAATACAACTGCCTGCAGGAAAGGCACCCACTGGTGACACCCGAGTGCAGTTTCACTCTGACCAACTCCGCTTATTGGTTGCCCATGAGACTCAGTTGGCAATTTATGATGCTTCTAAGATGGAACGCATTCGACAGTGGGTTCCACAAGACGTTCTGCCTGCTCCCATATCATATGCAGCTTATTCCTGCAACAGTCAGTTGGTTTATGCAACATTTTGTGATGGCAATACCGGGGTTTTTGATGCTGATAGCTTGAGACTAAGATGTCGTATCGCACTATCAACGTACTTGTCATCACCGACTTTGAGTGGAAGCCAAGCTGTGTATCCTGTTGTGGTTGCTGCTCATCCAATAGAGCCAAACCAATTTGCAGTTGGATTGACAGATGGGTCTGTGAAAGTGATAGAGCCAAGTGAATCGGAGAGTAAATGGGGAACTACACCTCCTACTGATAATGGGATATTGAATGGTAGGCCAACATCATCTTCTACAACAAGCAACCACACACCAGAGCAGCCACCGCGATAG 3384 0.4332 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLAGFTKVDDNRYSMKIFFEIRKQKYLEALDRQDKAKAVEILVGDLKVFSTFNEELYKEITQLLTLNNFRENEQLSKYGDTKTARGIMLIELKKLIEANPLFRDKLIFPTLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHTCTPPNGPLAPTPVNLPVAAVAKPTAYTSLGAHGPFPPAAATANANALAGWMANASASSSVQAAVVTASTMPVPQSQVSILKRPITPPTTRGLVDYPNADHEQLMKRLRPAPSLEEVSYPSARQASWSLDDLPRSVAMTLPQGSSVTSMDFHPSHQTLLLVGSNNGEIALWELAMRDRLVSKPFKIWDMSACSLPFQAAAVKDAPISVSRVTWSPDGSFVGVAFTKHLIHLYAYTGSNELAQRKEVDAHIGGVNDLAFAHPNKQLCIVTCGDDKLIKVWDLTGRRLFNFEGHEAPVYSICPHHKESIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGYWCTTMLYSADGSRLFSCGTSKDGESFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDGQIKFWDMDNINLLTSTDAEGGLQNLPRLRFNKEGNLLAVTTVDNGFKILANASGLRSLRTMETQGFEALRSPIESIKASGSSAVNVSPVNCKVERSSPVRPSPILNGVDPIGRNVEKPRSGEDATDRTKPWQLSEIADPVQCRLVTMPDSTDSSSKVVRLLYTNSGAGLLALGSNGVQKLWKWVRSEQNPSGKATASVVPQHWQPNSGLLMTNDISGVNLEEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTYLAFHPQDNNIIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTNLNILVSSGADAQLCVWSIDTWEKRKSIPIQLPAGKAPTGDTRVQFHSDQLRLLVAHETQLAIYDASKMERIRQWVPQDVLPAPISYAAYSCNSQLVYATFCDGNTGVFDADSLRLRCRIALSTYLSSPTLSGSQAVYPVVVAAHPIEPNQFAVGLTDGSVKVIEPSESESKWGTTPPTDNGILNGRPTSSSTTSNHTPEQPPR* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0786 1127 ProSiteProfiles Trp-Asp (WD) repeats profile. 592 623 IPR001680 GO:0005515
Aev06g0786 1127 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Aev06g0786 1127 SMART WD40_4 902 941 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 997 1033 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 859 899 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 397 435 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 820 856 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 484 525 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 1047 1088 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 528 571 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 335 374 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 441 482 IPR001680 GO:0005515
Aev06g0786 1127 SMART WD40_4 574 614 IPR001680 GO:0005515
Aev06g0786 1127 Gene3D - 759 1102 IPR015943 GO:0005515
Aev06g0786 1127 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Aev06g0786 1127 ProSiteProfiles Trp-Asp (WD) repeats profile. 448 483 IPR001680 GO:0005515
Aev06g0786 1127 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 909 944 - -
Aev06g0786 1127 SMART ctlh 34 92 IPR006595 -
Aev06g0786 1127 Gene3D - 408 676 IPR015943 GO:0005515
Aev06g0786 1127 PANTHER PROTEIN, PUTATIVE-RELATED 1 1124 - -
Aev06g0786 1127 SUPERFAMILY DPP6 N-terminal domain-like 961 1112 - -
Aev06g0786 1127 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1124 IPR027728 GO:0006355
Aev06g0786 1127 ProSitePatterns Trp-Asp (WD) repeats signature. 469 483 IPR019775 -
Aev06g0786 1127 MobiDBLite consensus disorder prediction 1092 1121 - -
Aev06g0786 1127 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 469 946 IPR011047 -
Aev06g0786 1127 MobiDBLite consensus disorder prediction 1088 1127 - -
Aev06g0786 1127 ProSiteProfiles Trp-Asp (WD) repeats profile. 909 950 IPR001680 GO:0005515
Aev06g0786 1127 MobiDBLite consensus disorder prediction 701 736 - -
Aev06g0786 1127 SUPERFAMILY Putative isomerase YbhE 335 529 - -
Aev06g0786 1127 Gene3D - 327 393 IPR015943 GO:0005515
Aev06g0786 1127 ProSiteProfiles Trp-Asp (WD) repeats profile. 341 383 IPR001680 GO:0005515
Aev06g0786 1127 SMART Lish 4 36 IPR006594 GO:0005515
Aev06g0786 1127 Pfam WD domain, G-beta repeat 447 482 IPR001680 GO:0005515
Aev06g0786 1127 Pfam WD domain, G-beta repeat 908 941 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0786 Aev-Chr6 5353724 5361518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0786 - - gmx:100808421 2051.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0786 06 5353724 5361518 Aev06g0786 06 5353724 5361518 ECH