Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0768 ATGTCCCTTTTCCTCCAAAGATCACTAAGGACAAGGAGGTCCAACATTAAACCCCAAATCTACGGACTTTCCTCGTTGCTGGCAAACTCGTTTGATTCAACGCATCACACCAGCTGCCATCGCCAATTCTCACACTCCCTCTCAAATTCGTTTGCATGCTTCAGTTACTGTTATGGTAATGCGTCTCACAGACACCGAGGTGGTGCCGGTGTTGTGTTTCCGACATCCCCATGGGTTCGGTTGTTGGGTTCTGAAGCCGCCGCCACCACCACCCAACACTCAACCTCCGATGGGCTAACGGTTGAGGGAATACTCGCCAATAATTGGAACATTCTAGACGAGAACGAAGGTGATTGGAAGAGTCATGCCAGTGCCATAGCTCAATCTATTAGTCTTATCAAACGCCGCTTACAGTGGAAGAAATTGAAAGTGAGGGTGGATATGTTATCATCACAGCTGAATAAGCCAGACCTTTGGGACGATCCTGTGCACGCTGGTCAAATAAGCAGAGAGCATGGTTCGCTAATGGGGAAGATGAAAGAGGTGAATGCGCTGGAACAAGAGTTAGTTGAGCATATTGACATGTTAAAGCTTGCTCGCGAAGAGAATGATGCTGAATTGGAATCGGAATCATTGAAAGCGTTGCTTGACATGAGAAGAAATGCAAAGGAGAAAGAGCTAGAGGCATTGCTTGCTGGAGAGCAAGATCCTTGTTCTTGCTACGTTGAGGTCCAGGCTGGTGCTGGGGGTACTGAAAGCATGGACTGGGCTGCAATGGTTATGCAGATGTATAAATCATGGGCCCAGCGACGTGGATATACCGTAACTGTAATGGATGAAATGCCTGGTGAGATTGCAGGAATCAAGCGAGCTACAATCAAAGTAGATGGTATGTTTGCATTTGGATATGCCAAAGCAGAAGTAGGAGTGCACAGGCTGGTCCGTATATCACCTTTTGACAGTAATAAGCGCCGGCATACTTCATTTGCTGCTGTAGCTGTAATTCCAATCCTTGGTGATGGATCTGCTCGTGTACAAATTAATGACTCTGATATTCGAATTGAACGATTTCGTGCTGGTGGTGCTGGTGGCCAACATGTTAATACTACAGAGAGTGCTGTAAGAGTAATTCATATTCCTACCGGAGTTACTGCAACTTGCCAGAATGAAAGATCACAACATCGGAATCTGGCTTCTGCGATGTCTGTGCTTCAGTCTAGATTAGACCAACTGGAGATGACACGCCAGGCCCAGTTGAATGCACAGCATACACAATCTCTCACCGACATAACTTGGGGCAGTCAAATACGTAGTTATGTGCTCCATCCTTACCGAATGGTGAAGGATCTTAGAACCAACTATGAGGTTTCAGATCCTGACTCTGTTCTCGAGGGTGATATAGACGATTTCATCTTGAGCTATCTATCAGCTTCTTTGGATAAAGATGGCGATGACGCTTAA 1461 0.4613 MSLFLQRSLRTRRSNIKPQIYGLSSLLANSFDSTHHTSCHRQFSHSLSNSFACFSYCYGNASHRHRGGAGVVFPTSPWVRLLGSEAAATTTQHSTSDGLTVEGILANNWNILDENEGDWKSHASAIAQSISLIKRRLQWKKLKVRVDMLSSQLNKPDLWDDPVHAGQISREHGSLMGKMKEVNALEQELVEHIDMLKLAREENDAELESESLKALLDMRRNAKEKELEALLAGEQDPCSCYVEVQAGAGGTESMDWAAMVMQMYKSWAQRRGYTVTVMDEMPGEIAGIKRATIKVDGMFAFGYAKAEVGVHRLVRISPFDSNKRRHTSFAAVAVIPILGDGSARVQINDSDIRIERFRAGGAGGQHVNTTESAVRVIHIPTGVTATCQNERSQHRNLASAMSVLQSRLDQLEMTRQAQLNAQHTQSLTDITWGSQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFILSYLSASLDKDGDDA* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0768 486 SUPERFAMILY Release factor 143 478 IPR045853 -
Aev06g0768 486 Gene3D - 338 434 - -
Aev06g0768 486 PANTHER PEPTIDE CHAIN RELEASE FACTOR PRFB1, CHLOROPLASTIC-RELATED 91 483 - -
Aev06g0768 486 PANTHER PEPTIDE CHAIN RELEASE FACTOR 2 91 483 - -
Aev06g0768 486 Hamap Peptide chain release factor 2 [prfB]. 115 479 IPR004374 GO:0005737|GO:0006415|GO:0016149
Aev06g0768 486 Coils Coil 182 202 - -
Aev06g0768 486 Pfam RF-1 domain 344 451 IPR000352 GO:0003747|GO:0006415
Aev06g0768 486 SMART PCRF_a_2 197 307 IPR005139 GO:0006415
Aev06g0768 486 Pfam PCRF domain 143 332 IPR005139 GO:0006415
Aev06g0768 486 Gene3D Release factor 118 228 - -
Aev06g0768 486 TIGRFAM prfB: peptide chain release factor 2 120 477 IPR004374 GO:0005737|GO:0006415|GO:0016149
Aev06g0768 486 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 358 374 IPR000352 GO:0003747|GO:0006415
Aev06g0768 486 Gene3D - 242 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0768 Aev-Chr6 5251927 5254500 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0768 K02836 - gmx:100797427 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0768 06 5251927 5254500 Aev06g0768 06 5251927 5254500 ECH