Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0760 ATGTCGTCGTCGTCGTTGCCGCCGCTGCCACCAAGACCAAGACCGCCGGGGTCTCGGGAAGAGGCTCGGAGGAAGTCTTACAAGGCATTGGTGACGGAGGATCGGAAGAAGAGGGAGGACAGCATGGTGGAGACCAGGAACAACATTCGCCATGATACCCTTCTCAAGAACCGAACACACCTCGCCCCTCAATCACCCACCCTCGCCCACTTACAGTTACAACGCAATCATGCGATGATCCAAAAAATATGGTCAAGAGAGCATGCTGCTCAGTTGGAAGCAACGAAGCATTTTTGCAATGTAATGGAAATTGAAGGCGGCCTTCTCATTGAGGAGGTAATCAACACAGGCATTGTCCCCAGGTTTGCGGACTTTCTTGGAATGCATGATGCACCCCAACTGCAGATCCAGGCTGCCTCCGCTCTCAGCATTCTCAGCGCTGCCAAGTCAGAGCACGCCTTGCTCGTCATCAGGCTCGGCGTGGTTCCCTTGTTTGTGAACCTGCTTCTGCACTCTGGGAGCACCCAAGACGTCAGAGAACATGCCATTTGGGGTTTAGGCAATCTTGCCGCCGACTCCCCAGCCAGCAGGGATCTTGTTCTCAAGCACGGCGCACTCTTGCCGATATTGGCTCAGCTTAGTCATCCCACCAATAATAATAAGTTAGTACGTAGTGTGTGGAGGGTTGGTGCGTGGGCTATATCGAATCTGTGCAGGGGAATCCCACCTCCCGAATTCCAAGAGGTGAAGGCAGCGCTGCCTAAGCTGAGGGAAGTGATGGTATTGTTTCGTGATGATGAAGAAATGATAGAAGAAGCATGCACGTCTCTCTCTTGTATTATGCTTGCCAGTACCACCCGCCCTGCTATTCCAAACATTCAAGCTGTACTCGACACTGGACTCTGCCCAATCCTTGTCCACCTTCTTCGGCATCCAAAATATGAAGTTATCAGTGCAGGTCTTCGCAGTGTAGGAAATCTGCTTAATGGTGATCATACTCAGGCTCAGGTTGTAATCGACATCGGAGTGCTGCCATGTCTTCATAAACTAATTACAATCAATAAAGAAGTAGACATCTTGAAGGAAGCTTGTTCGGCAATTTCAAATATCACAGCTGGAACTACAAAACAAGTACAAGCTGTGATCGATGCCGATATTATTCCCCCTCTCGAAATTCTTCTTCTGTATGCAGAAATGGAAATCAAGATAGAGGCTGCGTGGGCCATCGTCAATGCCACCAATGCAGGAACTCAAGATCAGATTAAGGCGATAGTGAATAACGGTCGTTGCATTAAGGCACTATGTGATATGTTGGTGAGTTCGGATCCAACGGGTGTGATGGTGTGTCTGGAGGGGCTGGATGACATCTTGACGGTGGGAGAAGCTGACAAGATAAAGAGAAAAGGTGGGAGCAATACCCACGCTCAAAAGGTTGTTGTGTGTGCAGGACTTGATAAGATCCGAAAATTGCAGACCCATAGCAACACTGCCATTAAAGCCAAGGCTGTCAACATGCTCAACAAATATTTTAATAACACTAATAATAATCAGCAGCAGCAGCAGCAAGATGATGATTTTACTTTCGATGTTCCCATTCCTCCTCCTACTAGGCTACCACCTGGTTGA 1626 0.4865 MSSSSLPPLPPRPRPPGSREEARRKSYKALVTEDRKKREDSMVETRNNIRHDTLLKNRTHLAPQSPTLAHLQLQRNHAMIQKIWSREHAAQLEATKHFCNVMEIEGGLLIEEVINTGIVPRFADFLGMHDAPQLQIQAASALSILSAAKSEHALLVIRLGVVPLFVNLLLHSGSTQDVREHAIWGLGNLAADSPASRDLVLKHGALLPILAQLSHPTNNNKLVRSVWRVGAWAISNLCRGIPPPEFQEVKAALPKLREVMVLFRDDEEMIEEACTSLSCIMLASTTRPAIPNIQAVLDTGLCPILVHLLRHPKYEVISAGLRSVGNLLNGDHTQAQVVIDIGVLPCLHKLITINKEVDILKEACSAISNITAGTTKQVQAVIDADIIPPLEILLLYAEMEIKIEAAWAIVNATNAGTQDQIKAIVNNGRCIKALCDMLVSSDPTGVMVCLEGLDDILTVGEADKIKRKGGSNTHAQKVVVCAGLDKIRKLQTHSNTAIKAKAVNMLNKYFNNTNNNQQQQQQDDDFTFDVPIPPPTRLPPG* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0760 541 SUPERFAMILY ARM repeat 25 513 IPR016024 -
Aev06g0760 541 MobiDBLite consensus disorder prediction 1 15 - -
Aev06g0760 541 PIRSF Importin_alpha 15 536 IPR024931 GO:0005737|GO:0006606|GO:0061608
Aev06g0760 541 MobiDBLite consensus disorder prediction 1 43 - -
Aev06g0760 541 PANTHER IMPORTIN ALPHA 16 523 - -
Aev06g0760 541 Pfam Armadillo/beta-catenin-like repeat 375 411 IPR000225 GO:0005515
Aev06g0760 541 Pfam Armadillo/beta-catenin-like repeat 334 372 IPR000225 GO:0005515
Aev06g0760 541 Pfam Armadillo/beta-catenin-like repeat 150 191 IPR000225 GO:0005515
Aev06g0760 541 Pfam Armadillo/beta-catenin-like repeat 110 147 IPR000225 GO:0005515
Aev06g0760 541 PANTHER IMPORTIN SUBUNIT ALPHA-4 16 523 - -
Aev06g0760 541 MobiDBLite consensus disorder prediction 16 43 - -
Aev06g0760 541 Gene3D - 77 510 IPR011989 -
Aev06g0760 541 Pfam Atypical Arm repeat 472 517 IPR032413 -
Aev06g0760 541 Pfam Importin beta binding domain 23 95 IPR002652 GO:0006606|GO:0061608
Aev06g0760 541 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 204 IPR000225 GO:0005515
Aev06g0760 541 SMART arm_5 149 191 IPR000225 GO:0005515
Aev06g0760 541 SMART arm_5 193 239 IPR000225 GO:0005515
Aev06g0760 541 SMART arm_5 288 329 IPR000225 GO:0005515
Aev06g0760 541 SMART arm_5 417 458 IPR000225 GO:0005515
Aev06g0760 541 SMART arm_5 106 147 IPR000225 GO:0005515
Aev06g0760 541 SMART arm_5 374 414 IPR000225 GO:0005515
Aev06g0760 541 SMART arm_5 331 372 IPR000225 GO:0005515
Aev06g0760 541 MobiDBLite consensus disorder prediction 515 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0760 Aev-Chr6 5183844 5186089 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0760 K15042 - vvi:100263083 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0760 06 5183844 5186089 Aev06g0760 06 5183844 5186089 ECH