Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0730 ATGAAATTTCGGTTCCCGCTAATAAAGCATGGCAGAAGAAGAAACATCATACAAAATCCAATCGCGTACTCTTTCCAATTCCACGAATATCACTACCACCACCACCACCTCAACTCTCTCATCAGCAATGCCTCCCAATTCAAGAACCTGAAACATGCCACCCAACTCCACGCCCAAGTCCTCACAACAAACCGTGCCTCCCACCCTATCATCTTCAACAACCTCGTTCTCTTGTACGCCAAATGCGGCTCCATCCACCATTCCCTCCTCTTCTTCACCGCTACCCCACGCGCCTCTCACAGCGTCGTCACTTTCACCACTCTCATCACCCAGCTCTCACGCTTCAACAGACCCTTCCTCGCCATCACTTATTTTAACAGCATGAGGCGCACCGGTATTTACCCCAACCATTTCACCTTCTCCGCCATCTTACCCGCCTGTGCCGACACGGCCGTGGTTGGCCATGGTCAGCAAATGCATGCTCTGATTCTTAAACATGGGTTTGAAACTGATACGTTTGTGGGTAGCGCGTTGCTTGACATGTACGCTAAGTGTGAGTGTGTGTTTTTGGCAGACAGGGTGTTCGATGAAATGCCCCATAGGAACCTTGTTTCTTGGAACTCTATGATTGTTGGGTTTTTGAAAAACAAGTTGTATTATCGTGCTATTGGGGCTTTCAGGGATGTTCTTCGCGAGCATTTGCTTGGTCCTGATCAAGTGAGTTTTTCGAGTGTGTTGAGTGCTTGTGCTGGCGTGCTTGACTTTGATTTTGGGAAGCAGGTGCATGGGAATGCTGTGAAGCGCGGTTTGGTCGGGTTGGCTTATGTGAGGAACTCGTTGGTGGACATGTATTGTAAGTGTAAGTTGTTTGATGAAGCAACCAAGTTGTTCTGTGCTGATGGAGATAGAGATGTTGTTACCTGGAATGTGATGATCATGGGATGTGTGCATAGTGAACAGTTTGAAGAAGCTTGCAGCTATTTCAGGGACATGAGAAGGGAAGGCATGATACCGGATGAGGCTTCATATTCCTCTGTTCTTCATGCTGCTGCGAGTGCTACGGCTTTGACTCAAGGCACCTTGATACACAACCAGATATTAAAAACAGGGCATGTGAAAAATGCATGCGTGTCGAGTTCATTGATAACAATGTATGGCAAATGTGGGAACTTGTTTGATGCTCATAGGGTCTTTGAAGAAACTGAGGATTGCAATGTGGTTTGTTGGACTGCTATGATAGCAGTTTGCCACCAACATGGCTGTGCAAATAAAGCAATTGAGTTGTTTGAGGACATGCTCAAAGAGGGGATCGTGCCTGAATACATTACTTTTGTTTCAGTGCTGTCGGCTTGCAGCCACACTGGACAGGTTGAAGATGGTTTTAAGTACTTCAATTCAATGACTAACATCCATAATATTAAACCGGGGCTTGAACATTATGCTTGCATGGTTGATTTGCTTGGTCGGGTTGGTCGCTTGGATGAAGCATGGAAGTTTATTGAATCAATGCCAATCAAGCCTGACTCCTCAGTTTGGGGGGCTCTGCTTGGAGCATGCGGAAAGTATGGCAATGTTGAAATGGGCAGGGAGGTCGCAGAGAAGCTTTTCAAGTTGGAACCAGATAATCCAGGAAATTACGTGCTTCTTGCGAATATTTATTCACGACATGGGATGTTGGAAAAGGCTGATGAGGTCAGGCAATTGATGGGGGTCAAGGGGGTTAGGAAAGAGACTGGATGTAGCTGGATTGATGTTAAGAATAGCACCTTTGTATTCACTGTGAGTGATAGGTCACATTCAAGGACAGATGAGATTTATGAAATGTTGCAGAAGTTGAAGGAGCTGGTAACGAAGAGAGGATATGTGGCTGAGACCCAGTTTGCTACTAACAGTGTAGAAGGGTCCGAAGAGCAGAGTTTGTGGCATCACAGCGAGAAATTAGCTCTTGCATTTGGTCTTCTGGTCCTCCCAGCTGGATCTCCAATAAGGATAAAGAAGAACCTGAGGACTTGTGGTGATTGTCATACTGTTATGAAGTTTGCTTCAGAGATTTTTCAGAGAGAGATTATTGTAAGAGATATCAACAGGTTTCACAGATTCACTAATGGGTTGTGCTCTTGTCGAGATTATTGGTGA 2136 0.456 MKFRFPLIKHGRRRNIIQNPIAYSFQFHEYHYHHHHLNSLISNASQFKNLKHATQLHAQVLTTNRASHPIIFNNLVLLYAKCGSIHHSLLFFTATPRASHSVVTFTTLITQLSRFNRPFLAITYFNSMRRTGIYPNHFTFSAILPACADTAVVGHGQQMHALILKHGFETDTFVGSALLDMYAKCECVFLADRVFDEMPHRNLVSWNSMIVGFLKNKLYYRAIGAFRDVLREHLLGPDQVSFSSVLSACAGVLDFDFGKQVHGNAVKRGLVGLAYVRNSLVDMYCKCKLFDEATKLFCADGDRDVVTWNVMIMGCVHSEQFEEACSYFRDMRREGMIPDEASYSSVLHAAASATALTQGTLIHNQILKTGHVKNACVSSSLITMYGKCGNLFDAHRVFEETEDCNVVCWTAMIAVCHQHGCANKAIELFEDMLKEGIVPEYITFVSVLSACSHTGQVEDGFKYFNSMTNIHNIKPGLEHYACMVDLLGRVGRLDEAWKFIESMPIKPDSSVWGALLGACGKYGNVEMGREVAEKLFKLEPDNPGNYVLLANIYSRHGMLEKADEVRQLMGVKGVRKETGCSWIDVKNSTFVFTVSDRSHSRTDEIYEMLQKLKELVTKRGYVAETQFATNSVEGSEEQSLWHHSEKLALAFGLLVLPAGSPIRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGLCSCRDYW* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0730 711 Pfam PPR repeat 278 298 IPR002885 -
Aev06g0730 711 Pfam PPR repeat 204 231 IPR002885 -
Aev06g0730 711 Pfam PPR repeat 176 202 IPR002885 -
Aev06g0730 711 Pfam PPR repeat 480 503 IPR002885 -
Aev06g0730 711 TIGRFAM PPR: pentatricopeptide repeat domain 306 340 IPR002885 -
Aev06g0730 711 TIGRFAM PPR: pentatricopeptide repeat domain 480 503 IPR002885 -
Aev06g0730 711 TIGRFAM PPR: pentatricopeptide repeat domain 407 439 IPR002885 -
Aev06g0730 711 TIGRFAM PPR: pentatricopeptide repeat domain 103 136 IPR002885 -
Aev06g0730 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 304 338 IPR002885 -
Aev06g0730 711 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 30 704 - -
Aev06g0730 711 Gene3D Tetratricopeptide repeat domain 256 361 IPR011990 GO:0005515
Aev06g0730 711 Gene3D Tetratricopeptide repeat domain 156 255 IPR011990 GO:0005515
Aev06g0730 711 PANTHER OS07G0578800 PROTEIN-RELATED 30 704 IPR045215 GO:0003723|GO:0009451
Aev06g0730 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 405 439 IPR002885 -
Aev06g0730 711 Gene3D Tetratricopeptide repeat domain 22 155 IPR011990 GO:0005515
Aev06g0730 711 Gene3D Tetratricopeptide repeat domain 378 650 IPR011990 GO:0005515
Aev06g0730 711 Pfam PPR repeat family 101 148 IPR002885 -
Aev06g0730 711 Pfam PPR repeat family 303 350 IPR002885 -
Aev06g0730 711 Pfam PPR repeat family 405 452 IPR002885 -
Aev06g0730 711 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 101 135 IPR002885 -
Aev06g0730 711 Pfam DYW family of nucleic acid deaminases 620 711 IPR032867 GO:0008270
Aev06g0730 711 SUPERFAMILY TPR-like 325 544 IPR011990 GO:0005515
Aev06g0730 711 Pfam E motif 522 584 IPR046848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0730 Aev-Chr6 5025037 5027172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0730 101 711 Glycoside Hydrolase AT3G49170 38.387 9.99e-155 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0730 - - ccaj:109797249 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0730 06 5025037 5027172 Aev06g0730 06 5025037 5027172 ECH