Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0702 ATGGCATTCGCATTCCCCTGTTTTAGCCTTCTTCTCATCTATACCTTATTCTTTTGGTCCAGCGCACTTGTCTTGTCTGCACCTTCGGGAGCAGCAGAAGCTAGTGATTCTCAAATTACAGTACCAATCTCTTCTCTCATCAGAAAAAAGCTTTTCGACGCTATGTTCCTGCACAAAGATGACAATGCATGCCCTGCCAAGAAATTCTACCCTTACAAGGCATTCATTCGAGCAGCAAAAACATTTCCTGAATTCGGCAACAGGGGTAGTTTAGGCACGCGGAAGCGTGAGATTGCTGCATTTCTGGCTCAGATTTCGCATGAGACCACAGGTGGATGGGCCACTGCACCTGATGGCCCGTATGCTTGGGGCTTGTGCTTCAAGGAAGAGAGGAATCCTCCCATTAACTACTGCGATTCCACCAACAAAGAATGGCCTTGTTTCCCTGGCAAGAGTTACAATGGAAGAGGACCTATTCAACTTTCTTGGAACTTCAACTATGGGCCAGCAGGGAAGGCCTTGGGATTTGATGGGCTGAGGAACCCAGAAATAGTGGCCAACAATTCAGTGGTTGCATTCAGAAGTGCTCTGTGGTTTTGGATGACAGAGGGAGGAAATGGAATACCCTCTTGCCACAATGTGATGGTTGGCAATTATGTGCCAACACAAGCTGATGTTGCAGCTAACAGAACAGTTGGCTATGGCTTGGTCACTAACATTATCAATGGGGCACTCGAATGTGGAATTCCTGATGATCCCAGAGTTAATGATAGGATTGGATTCTTCAAAAGATATGCCAAGTTGTTCAATGTGGACACTGGACCTAACTTGGATTGTGCTAATCAGAAACCCTTTTGA 858 0.4604 MAFAFPCFSLLLIYTLFFWSSALVLSAPSGAAEASDSQITVPISSLIRKKLFDAMFLHKDDNACPAKKFYPYKAFIRAAKTFPEFGNRGSLGTRKREIAAFLAQISHETTGGWATAPDGPYAWGLCFKEERNPPINYCDSTNKEWPCFPGKSYNGRGPIQLSWNFNYGPAGKALGFDGLRNPEIVANNSVVAFRSALWFWMTEGGNGIPSCHNVMVGNYVPTQADVAANRTVGYGLVTNIINGALECGIPDDPRVNDRIGFFKRYAKLFNVDTGPNLDCANQKPF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0702 285 PANTHER CHITINASE-RELATED 15 285 - -
Aev06g0702 285 PIRSF Endochitinase 18 285 IPR016283 GO:0004568|GO:0005975
Aev06g0702 285 Gene3D - 50 285 - -
Aev06g0702 285 Gene3D Endochitinase, domain 2 129 187 - -
Aev06g0702 285 ProSitePatterns Chitinases family 19 signature 2. 191 201 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev06g0702 285 PANTHER OS05G0138200 PROTEIN 15 285 - -
Aev06g0702 285 Pfam Chitinase class I 47 279 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aev06g0702 285 SUPERFAMILY Lysozyme-like 43 285 IPR023346 -
Aev06g0702 285 CDD chitinase_GH19 47 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0702 Aev-Chr6 4819796 4821764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0702 42 285 Glycoside Hydrolase AT4G01700 73.361 2.04e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0702 - - gmx:100784196 439.113