Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0700 ATGAGGAGAACTTCTACTGTTGTGGGTGTGCTTCTGGTGCTTGCATTATTCAGCTGTGGCCCATGGATAGTGAGGTGCAGCTCACTATGCAAACAGACAAACTTGGAGGTTCGGCCTCACAGTGTCAGTATTACCGAATTTGGTGCCGTGGGAGATGGGGTCACTCTCAACACAAAGGCATTCCAGAATGCCATCTTCTACCTAAATTCGTTTGCAGACAAAGGCGGGGCAAAGCTTTTCGTACCAGCTGGCCGGTGGTTAACCGGTAGTTTTGATCTCATCAGCCATCTAACTCTCTGGCTTGACAATGATGCAGTAATTCTTGGATCAACGAACTCTGAAGATTGGCCAGTTGTTGATCCTTTACCATCATATGGGCGAGGAAGGGAGTTGCCAGGTGGAAGACACAAGAGCCTCATTTTCGGACGCAATTTGACCGATGTCATCATAACAGGTAACAATGGAACGATCGACGGGCAAGGGAGTGTCTGGTGGAGCAAGTTTAGGAACAAAACCCTGGATTATACCCGTCCTCATTTGGTTGAATTGATGAATTCAACAGGAGTTCTCATCTCAAATTTAACCTTCTTGAATTCTCCATTTTGGACTATTCATCCTGTATATTGCAGCCAAGTTACAGTTCAGAATGTCAAGATCCTAGCTCCTCTTGATTCGCCAAACACCGATGGGATTGATCCAGACTCTTCTGATGATGTATGCATTGAAGACTGTTATATAAGTACTGGCGATGATCTGATTGCCATAAAAAGTGGGTGGGACGAGTATGGCATCGCATTCGGCCGTCCCAGCACAAACATCATCATCCACAGGCTCACTGGGAAAACTCAAACCAGTGCAGGAATTGCCATTGGAAGCGAGATGTCCGGCGGGGTATCGAAAGTCCATGCACAAGACATTCGCTTCTTTGATTCATACACAGCAATAAGAGTAAAGACTTCTCCTGGACGAGGTGGTTATGTAAGAAACGTTTACATCTCTAACATGACACTGTCTAATGTGGACATTGCCATTAGGTTCACCGGCACATATGGGGACCATCCTGATGATGGTTATGACCCCAATGCTCTTCCTTTGATAGAGAAGATTACAATCAAGGATGTGCTCGGAGGAAATATCAGCCGTGCAGGTCTTATAGAGGGCATACAAGGTGACAACTTTGTCAACATCTGCCTATCAAACATAGTACTTAATGTGAGCTCTAGCTATCCATGGAACTGCTCTAATGTCGACGGATACTCAGACATGGTCTGGCCGGAAGCTTGCCAGCCTCTCAAGGAGAGGATATTCCCTGAGCATTGTTCGGATTGTTACTATTTGTCGAATCAGCTGCCGAGTTCAAATAATCAAAACAGAGGACAAATTTCTGGCGACATAAGAAGTTGA 1404 0.4551 MRRTSTVVGVLLVLALFSCGPWIVRCSSLCKQTNLEVRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSEDWPVVDPLPSYGRGRELPGGRHKSLIFGRNLTDVIITGNNGTIDGQGSVWWSKFRNKTLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVKILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIIIHRLTGKTQTSAGIAIGSEMSGGVSKVHAQDIRFFDSYTAIRVKTSPGRGGYVRNVYISNMTLSNVDIAIRFTGTYGDHPDDGYDPNALPLIEKITIKDVLGGNISRAGLIEGIQGDNFVNICLSNIVLNVSSSYPWNCSNVDGYSDMVWPEACQPLKERIFPEHCSDCYYLSNQLPSSNNQNRGQISGDIRS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0700 467 PANTHER PECTIN LYASE-RELATED 8 447 - -
Aev06g0700 467 SMART pbh1 327 348 IPR006626 -
Aev06g0700 467 SMART pbh1 209 235 IPR006626 -
Aev06g0700 467 SMART pbh1 236 268 IPR006626 -
Aev06g0700 467 SMART pbh1 270 292 IPR006626 -
Aev06g0700 467 SMART pbh1 298 319 IPR006626 -
Aev06g0700 467 Gene3D - 27 421 IPR012334 -
Aev06g0700 467 SUPERFAMILY Pectin lyase-like 35 432 IPR011050 -
Aev06g0700 467 PANTHER OS07G0245200 PROTEIN 8 447 - -
Aev06g0700 467 Pfam Glycosyl hydrolases family 28 137 417 IPR000743 GO:0004650|GO:0005975
Aev06g0700 467 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0700 Aev-Chr6 4797264 4799974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0700 1 447 Glycoside Hydrolase AT3G62110 70.264 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0700 - - gmx:100782602 827.78