Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0699 ATGGCAAACCCAACACAACCTAATGTTGGGTTCACCACTTCAAACCCAGACAGACAGAGTCCTATCCTTGACAAGAGTCCAATTCCACCTCCTCCAACTTTTACAGCACCACCTAGATTCCCTCCACCAACAATACACTTGCAACAAGAACAAGGTTCTTCCTCTTCCCCTTCAGTTAAACCCCCAAATGTTTTGTCACCAGCCAATGGGGTTAAAACTGGCAGCCCTGTTCCTCACCTGAGCACCCCTCCAGGGCCTCCTGTTTTTACTTCGCCTGTCCGTCCAGCTGCTGTTCCTTTCCGCACGTCCCCTGCGTCGCCTCAGCCGCTTGCTTTCTCTTCAGGCTCATCTTTGCCAACATCATCGCCGCCACCGCCGCCGCAATTTTCAAATGGATCGTTTGAGTTGCAGCACCAAGTTTCTGATAGCATAGAGGACCATGTTCCTGCTGGGGATTCATCCTTGGTTCTTTTCTCAGCTCATAAGGTATTGAAACAGAAGAAACAAGCTAATGTACCCAGTTTGGGTTTCGGGGCATTGGTCTCTCCTGGAAGGGATGTCTCAACAGGCCCTCAAGTTATTCAGCGTGATCCCCATCGCTGTCAAAGCTGTGGAGCTTATGCAAATATCTATTGCAACATATTGCTTGGATCAGGCCAGTGGCAGTGTGTTATTTGCCGGAAACTGAATGGAAGTGATGGTGAGTACATTGGACATAGCAGGGAAGATCTTCACAGACTTCCGGAGCTATCTTCACCAATGGTTGACTATGTTCAAACTGGGAACAAGGGACCTAGTTTTGTTCCAGTTTCAGATTCTAGAATGTCTGCCCCAGTTGTTCTTGTTATAGATGAATGTTTAGATGAACCCCACTTGCACCATCTACAGAGCTCTTTGCACGCATTTGTTGATTCTCTCCCTCCAACAACAAGATTAGGAATTATACTGTATGGCCGCACTGTTTCAGTTTATGACTTTTCAGAAGAGTCAATTGCATCTGCTGATGTGCTTCCTGGTGACAAATCACCGAGTCAAGAAGCTTTGAAAGGATTGATCTATGGTACTGGAATATACTTGTCAGCAATGCATGCTTCACTGCCGGTAGCACATTCCATATTTTCATCATTGAGGCCATACAAGTTGAACATACCAGAAGCTTCGAGAGATCGGTGCCTCGGAACTGCTGTTGAGGTTGCTCTTGCTATAATTCAGGGCCCATCTGCTGATTTGTCACGAGGGATAGTCAAAAGGTCAGGGGGTAATAGTAGAATTATTGTTTGTGCTGGTGGACCGAACACCTATGGACCTGGATCAGTTCCTCATTCTTTTAATCACCCTAATTATCCATACATGGAAAAGACAGCATTAAAATGGATGGAGAACCTTGGTCGAGAGGCTCATCGACAGAATACTGTAGTTGATATTTTATGTGCTGGGACGTGTCCTGTAAGAGTTCCTATCTTACAGCCTCTTGCAAAAGCATCAGGTGGAGTCTTGGTTCTCCATGATGATTTTGGGGAAGCCTTTGGTGTTAATTTGCAGAGGGCATCTGCCAGGTCATCAGGTTCTCATGGTTTGTTAGAATTGCGCACGTCAGATGATATTCTCATAACTCAAGTTGTGGGTCCTGGGGAAGAGTCACATGTAGATACCCATGAAACATTTAAAAATGACACTGCCATTTATATTCAAATGCTGAGTGTGGAAGAAACGCAGAGCTTCTCTGTCTCCATGGAGACTAAAGGAGATATCAAAAGTGATCATCTCTTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTTCCAAGCTGATGTTTCCAGGGTTATTACCGTTAGACTGCCCACAGTGGATAGTATTTCAGGATATCTTGAGAGTGTTCAGGATGAAGTGGCTGCTGTCCTCATTGCAAAAAGAACTCTGTTACGAGCCAAAAACCATTCAGATGCAATTGATATGCGAGCAACAATAGATGAAAGAGTTAAGGATATTACCCTAAAATTTGGCCCTCAAGTAGCCAAATCAAAGCTTCACCGGTTCCCAAAGGAGCTTTCTCTCTTACCAGAGCTCCTTTTCCATCTCAGGAGAGGACCACTATTGGGAAGCATTATTGGCCATGAAGATGAGAGGTCTGTGCTGAGAAACCTGTTTCTGAATGCATCCTTTGATCTGTCACTCCGAATGGTGGCTCCTCGTTGTCTAATGCACAGGGAGGGAGGAACTTTTGAGGAGCTACCAGCCTATGATCTTGCAATGCAGTCGGATGCTGCTGTTGTACTTGACCATGGCACTGATGTCTTCATTTGGTTGGGTGCTGAACTAGCAGCTGATGAAGGAAGAAGTGCTGCTGCTCTAGCTGCTTGCCGGACATTGGCCGAAGAGCTGACTGAATTCCGTTTTCCAGCTCCTCGCATCCTTGCATTTAAGGAGGGTAGCTCCCAGGCTAGGTATTTCGTCTCTCGCCTCATACCAGCACACAAGGATCCTCCTTATGAGCAGGAGGCAAGATTCCCGCAACTCAGGTCATTGACACAAGAACAGCGAACTAAACTGAAAAGCAGTTTTGTTCACTTTGATGATCCTAGTTTCTCTACAATCGCTATCGCGCGCTTCGTTCCCCTCCGTCATCTCTGCAATCGGTTCTCGTCGTTCAGGATGGCAGGGAGTGAAGCCAAAAAAGCTAGCGGAGCCAAGCAATCTGGTGCGAAGAAGAAGGAGGTGAAGAAGGAGACTGGTTTAGGACTCACCAATAAGAAGGCTGACAACTTTGGAGAGTGGTATTCCGAGGTGGTTGTTAATGCGGAAATGATTGAGTACTATGACATTTCTGGCTGCTACATTTTGAGGCCTTGGGCTATGGCAATATGGGAGATCATGCAAGGATTTTTTGATCCTGAAATAAAGAAGATGAAAATCAAGAACTGCTACTTCCCTTTATTTGTGTCCCCTGGAGTTTTGGAAAAGGAGAAGGAACACGTCGAGGGATTTGCTCCAGAGGTTGCTTGGGTGACAAAATCTGGGAAAACCGATTTAGAAATTCCCATTGCTATTCGACCAACTAGTGAAACTGTCATGTATCCCTACTACTCCAAGTGGATTAGGGGACATCGTGACCTGCCTTTGAAACTTAACCAATGGTGCAATGTTGTTAGATGGGAGTTTAGCAACCCAACACCATTCATCAGGAGTCGTGAGTTCCTTTGGCAGGAAGGACATACTGCTTTTGCAACAAAGGAAGAAGCAGATGCTGAGGTTCTAGAGATATTGGAATTATATAGACGTATATATGAAGAGTATTTGGCAATTCCTGTCATTAAGGGTAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGACTTTACACTACTAGTGTTGAGGCATTTATTCCAAACACTGGCCGTGGTATACAAGGTGCAACTTCTCATTGTCTTGGCCAAAATTTTGCTAAAATGTTTGAGATCAACTTTGAAAATGAGAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGTACTCGAACTATTGGGGTCATGGTGATGGTTCATGGTGATGACAAGGGATTAGTGCTGCCTCCTAAAGTAGCATCAGTCCAAGTTATTGTGATTCCTGTGCCTTATAAAGATGCTGATACTCAAGGAATCTTTGATGCCTGTTCAGCAACTGTCAGTTCCTTGTGTGAAGCAGGTATTCGTGCTGAGTCAGATTTCAGAGATAACTATTCTCCCGGGTGGAAGTATTCACACTGGGAAATGAAGGGTGTTCCTCTTAGGATTGAAATTGGACCAAAGGATTTAGCAAATAAGCAGGTCCGTGTTGTTCGACGTGATAATGGAGCAAAGATAGACATTGCTAGTGCTAATTTGGTTGAGGAAGTCAAGAAGTTACTTGATAGTATTCAACAGAACCTTTTTGATATCGCAAAACAAAAACGAGATGAATGCATTCAGGTTGTACATACTTGGGATGAATTTGTACAAGCTTTGAATCAAAGAAAAATGATCTTAGCTCCTTGGTGCGATGAGGAGGCGGTTGAAGCAGATGTCAAAGCAAGGACAAAGGGTGAGATGGGAGCAGCCAAGACACTTTGTAGCCCTTTTGATCAGCCAGAACTCCCGGAAGGTACCAAGTGCTTTGCGTCAGGAAAGCCTGCGACGAAGTGGACATACTGGGGAAGAAGTTACTAG 4188 0.4489 MANPTQPNVGFTTSNPDRQSPILDKSPIPPPPTFTAPPRFPPPTIHLQQEQGSSSSPSVKPPNVLSPANGVKTGSPVPHLSTPPGPPVFTSPVRPAAVPFRTSPASPQPLAFSSGSSLPTSSPPPPPQFSNGSFELQHQVSDSIEDHVPAGDSSLVLFSAHKVLKQKKQANVPSLGFGALVSPGRDVSTGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVICRKLNGSDGEYIGHSREDLHRLPELSSPMVDYVQTGNKGPSFVPVSDSRMSAPVVLVIDECLDEPHLHHLQSSLHAFVDSLPPTTRLGIILYGRTVSVYDFSEESIASADVLPGDKSPSQEALKGLIYGTGIYLSAMHASLPVAHSIFSSLRPYKLNIPEASRDRCLGTAVEVALAIIQGPSADLSRGIVKRSGGNSRIIVCAGGPNTYGPGSVPHSFNHPNYPYMEKTALKWMENLGREAHRQNTVVDILCAGTCPVRVPILQPLAKASGGVLVLHDDFGEAFGVNLQRASARSSGSHGLLELRTSDDILITQVVGPGEESHVDTHETFKNDTAIYIQMLSVEETQSFSVSMETKGDIKSDHLFFQFAIQYSNVFQADVSRVITVRLPTVDSISGYLESVQDEVAAVLIAKRTLLRAKNHSDAIDMRATIDERVKDITLKFGPQVAKSKLHRFPKELSLLPELLFHLRRGPLLGSIIGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDAAVVLDHGTDVFIWLGAELAADEGRSAAALAACRTLAEELTEFRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRSLTQEQRTKLKSSFVHFDDPSFSTIAIARFVPLRHLCNRFSSFRMAGSEAKKASGAKQSGAKKKEVKKETGLGLTNKKADNFGEWYSEVVVNAEMIEYYDISGCYILRPWAMAIWEIMQGFFDPEIKKMKIKNCYFPLFVSPGVLEKEKEHVEGFAPEVAWVTKSGKTDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADAEVLEILELYRRIYEEYLAIPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACSATVSSLCEAGIRAESDFRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRVVRRDNGAKIDIASANLVEEVKKLLDSIQQNLFDIAKQKRDECIQVVHTWDEFVQALNQRKMILAPWCDEEAVEADVKARTKGEMGAAKTLCSPFDQPELPEGTKCFASGKPATKWTYWGRSY* 1396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0699 1395 MobiDBLite consensus disorder prediction 46 63 - -
Aev06g0699 1395 Pfam Sec23/Sec24 beta-sandwich domain 524 615 IPR012990 -
Aev06g0699 1395 CDD gelsolin_like 730 821 - -
Aev06g0699 1395 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 62 863 IPR037364 -
Aev06g0699 1395 Gene3D Sec23/Sec24 helical domain 617 736 - -
Aev06g0699 1395 MobiDBLite consensus disorder prediction 23 44 - -
Aev06g0699 1395 CDD trunk_domain 272 515 - -
Aev06g0699 1395 SUPERFAMILY Helical domain of Sec23/24 628 728 IPR036175 GO:0006886|GO:0006888|GO:0030127
Aev06g0699 1395 MobiDBLite consensus disorder prediction 79 93 - -
Aev06g0699 1395 MobiDBLite consensus disorder prediction 1 21 - -
Aev06g0699 1395 Pfam Prolyl-tRNA synthetase, C-terminal 1322 1395 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 977 1192 IPR006195 -
Aev06g0699 1395 SUPERFAMILY beta-sandwich domain of Sec23/24 28 626 - -
Aev06g0699 1395 Gene3D Severin 744 840 IPR029006 -
Aev06g0699 1395 SMART ProRS_C_1_2 1322 1395 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 Hamap Proline--tRNA ligase [proS]. 915 1395 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 SUPERFAMILY vWA-like 279 511 IPR036465 -
Aev06g0699 1395 Gene3D Bira Bifunctional Protein; Domain 2 915 1192 IPR045864 -
Aev06g0699 1395 TIGRFAM proS_fam_I: proline--tRNA ligase 916 1395 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 Gene3D - 1193 1313 IPR036621 -
Aev06g0699 1395 Pfam Sec23/Sec24 zinc finger 198 236 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aev06g0699 1395 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 1015 1180 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aev06g0699 1395 Gene3D - 188 251 - -
Aev06g0699 1395 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 62 863 - -
Aev06g0699 1395 MobiDBLite consensus disorder prediction 1 133 - -
Aev06g0699 1395 CDD ProRS_core_arch_euk 921 1182 IPR033721 -
Aev06g0699 1395 Pfam Sec23/Sec24 trunk domain 280 506 IPR006896 GO:0006886|GO:0006888|GO:0030127
Aev06g0699 1395 SUPERFAMILY Zn-finger domain of Sec23/24 188 261 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aev06g0699 1395 SUPERFAMILY Class II aaRS and biotin synthetases 920 1186 IPR045864 -
Aev06g0699 1395 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 730 863 IPR036180 -
Aev06g0699 1395 Gene3D von Willebrand factor, type A domain 278 523 IPR036465 -
Aev06g0699 1395 SUPERFAMILY C-terminal domain of ProRS 1317 1395 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 SUPERFAMILY Class II aaRS ABD-related 1187 1313 - -
Aev06g0699 1395 CDD ProRS_anticodon_zinc 1188 1395 - -
Aev06g0699 1395 Pfam Sec23/Sec24 helical domain 629 725 IPR006900 GO:0006886|GO:0006888|GO:0030127
Aev06g0699 1395 Pfam Anticodon binding domain 1199 1295 IPR004154 -
Aev06g0699 1395 Gene3D - 1316 1395 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 PRINTS Prolyl-tRNA synthetase signature 1054 1065 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 PRINTS Prolyl-tRNA synthetase signature 1044 1052 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 PRINTS Prolyl-tRNA synthetase signature 973 991 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Aev06g0699 1395 PRINTS Prolyl-tRNA synthetase signature 1014 1025 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0699 Aev-Chr6 4777688 4786790 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0699 - - gmx:100781518 1507.66