Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0681 ATGAAGCATTCTCATACTATTTTACCACAAGCATTCTCTGTATTTTTCTTTGCTTTAATTCTTTCCATCCAAGCTAGACATCACCATCATCATTCCCCCAATACAAAACACAAGCATTCACACTCTCACCACTCACATTCTCATAATTCATCTAAAACTCCACAACCTCCTGCACCTCCTAGTCCTAGTCCTAGTCCTCCGGATGATGCATCTTCCATTTTCGATGTAAGAAAATTCGGTGCCATAGGAGATGGAATTGCAGATGATACAGAGCCATTCAAGATGGCATGGGACACTGCATGCCAAAGTGAATCATCACTTAATGTTATGCTTGTTCCTCAAGGCTTCTCCTTCATCATTCAGTCTACTATTTTCACAGGACCTTGTCAAGGTGGCATAGTATTGGAGGTGGATGGAACTCTTATGCCACCAGATGGACCTGAGTCTTGGCCAAAGAACAATAGTAGGCATCAATGGCTTGTCTTTTACAGAATCAATGGAATGTCACTGCAAGGAAGTGGTGTTATAGATGGCAGAGGAGAAAAATGGTGGGACCTTCCTTGTAAGCCTCACAAGGGACCAAATGGGACAACATTGCCAGGACCTTGTGATAGTCCAATTGCCATAAGGTTTTTCATGAGTTCCAACTTGACTGTACAAGGACTTAGGATCAAGAACAGCCCTCAGTTTCATTTCAGATTTGATGGCTGCAGAAATGTCCATATAGAATCTATCTACATAACATCTCCAAAACTAAGCCCCAATACTGATGGAATTCACATTGAAAATACCAATGATGTGAAGATATATAACTCTGTCATATCTTGTGGTGATGACTGTGTGTCCATCGGTTCCGGTTGCTATGATGTTGATATAAAGAACATTACTTGTGGTCCAGGTCATGGAATCAGCATTGGTAGCCTTGGAAATCACGAGACTCGAGCTTGTGTTTCAAACATTACAGTAAGAGACTCAGCTATGAAAATGACAGATAATGGAGTTAGGATCAAGACATGGCAAGGTGGATCAGGATCTGTATCAGGGGTGAAATTCAGTAACATTGAAATGGATAGTGTGAGAAATCCTATCATAATTGACCAGTTCTACTGCCTCTTCATGAACTGCACCAACAAGACTTCTGCTGTGTTTGTATCAGATATTGTTTACACAAACATCAGAGGAACTTATGATATAAGGAGCACTCCTATGCGTTTTGCTTGCAGTGACACTGTTCCATGCACCAACTTAACTCTCTCAGATATTGAGCTTTTTCCTTCTCAAGGATATGTAGTTCATGACCCTTTCTGTTGGAATGCTTATGGAGATTTGGAGACACTAACTATTCCACCAGTTTCTTGCTTGCTGGAGGGAACTCCTCAGTCCATGTTAGACACTGATATGATTCATTGTTGA 1413 0.4105 MKHSHTILPQAFSVFFFALILSIQARHHHHHSPNTKHKHSHSHHSHSHNSSKTPQPPAPPSPSPSPPDDASSIFDVRKFGAIGDGIADDTEPFKMAWDTACQSESSLNVMLVPQGFSFIIQSTIFTGPCQGGIVLEVDGTLMPPDGPESWPKNNSRHQWLVFYRINGMSLQGSGVIDGRGEKWWDLPCKPHKGPNGTTLPGPCDSPIAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCRNVHIESIYITSPKLSPNTDGIHIENTNDVKIYNSVISCGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGNHETRACVSNITVRDSAMKMTDNGVRIKTWQGGSGSVSGVKFSNIEMDSVRNPIIIDQFYCLFMNCTNKTSAVFVSDIVYTNIRGTYDIRSTPMRFACSDTVPCTNLTLSDIELFPSQGYVVHDPFCWNAYGDLETLTIPPVSCLLEGTPQSMLDTDMIHC* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0681 470 ProSitePatterns Polygalacturonase active site. 294 307 IPR000743 GO:0004650|GO:0005975
Aev06g0681 470 PANTHER - 7 460 - -
Aev06g0681 470 MobiDBLite consensus disorder prediction 28 72 - -
Aev06g0681 470 MobiDBLite consensus disorder prediction 53 67 - -
Aev06g0681 470 Gene3D - 63 461 IPR012334 -
Aev06g0681 470 SMART pbh1 237 263 IPR006626 -
Aev06g0681 470 SMART pbh1 346 367 IPR006626 -
Aev06g0681 470 SMART pbh1 264 285 IPR006626 -
Aev06g0681 470 SMART pbh1 287 307 IPR006626 -
Aev06g0681 470 SMART pbh1 317 338 IPR006626 -
Aev06g0681 470 PANTHER POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN 7 460 - -
Aev06g0681 470 SUPERFAMILY Pectin lyase-like 67 460 IPR011050 -
Aev06g0681 470 MobiDBLite consensus disorder prediction 28 48 - -
Aev06g0681 470 Pfam Glycosyl hydrolases family 28 105 423 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0681 Aev-Chr6 4655461 4657411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0681 68 470 Glycoside Hydrolase AT1G02460 69.951 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0681 - - gmx:100778836 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0681 06 4655461 4657411 Aev06g0681 06 4655461 4657411 ECH