Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0676 ATGGGACTGTCATTCACGAAGCTGTTCAGCCGGCTGTTCGCGAAGAAGGAGATGCGTATACTTATGGTGGGTCTCGATGCTGCCGGTAAGACCACCATCCTCTACAAGCTCAAGCTTGGAGAGATCGTCACCACCATTCCCACCATCGGGTTTAATGTGGAAACGGTCGAATATAAGAACATCAGCTTCACTGTGTGGGATGTTGGTGGCCAGGACAAGATCCGTCCTTTGTGGAGACATTACTTTCAAAATACACAAGGACTTATTTTTGTGGTAGACAGCAATGATCGAGACCGTGTTGTTGAAGCTAGAGATGAGCTGCATAGGATGTTGAATGAGGATGAGTTGAGGGATGCTGTGCTTCTAGTTTTTGCAAACAAGCAAGATCTTCCAAATGCTATGAATGCTGCTGAAATAACCGATAAGCTCGGCCTTCATTCGCTCCGTCAACGTCACTGGTATATTCAGAGCACATGTGCTACATCTGGTGAAGGACTTTATGAAGGACTTGACTGGCTCTCAAACAACATTGCAAACAAGTCATGCATGCTGAGAGTGGATACCCAAACTCCTGGGTGGGAGAAGTCTCTCACAAAAGTGATCAAGCGTGTCAAAGATGTATCATACAGCATAGATGTAGCACATGGGATTGTTAGCATTTCTGGGGAAATAGATCCAAACAAGTTACTGTCAGAAATTAAAAAAGCTGGGAAACATGCGGAACTCATCCGTGCTGATTGTGGTGTTGCAATCTCTCAACCCAACTATGGACACGTGTACGGTTACGATGATGGAACCATATTCTATAATAATGGCCAAACGGTGGCTGCTAGTCCATACTCATCACCATCATGTTATTGTTATTATTATGATGCTCTACCTGCTGCGGGACATGGATGCACCCAAATCCAATATCATGATTATGATCCACACGATCACAACCACCACTTTAATCGTCTTTCTCTCCCACCACAGCATGTGCCTCCTACTCCTCTATTCCCTACACCAACTGCACCACCTGCGGAAAATAATCATGATGGTTCGTACAATTCTGCTTGCATCATTAGTTAG 1071 0.4482 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKSCMLRVDTQTPGWEKSLTKVIKRVKDVSYSIDVAHGIVSISGEIDPNKLLSEIKKAGKHAELIRADCGVAISQPNYGHVYGYDDGTIFYNNGQTVAASPYSSPSCYCYYYDALPAAGHGCTQIQYHDYDPHDHNHHFNRLSLPPQHVPPTPLFPTPTAPPAENNHDGSYNSACIIS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0676 356 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Aev06g0676 356 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Aev06g0676 356 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Aev06g0676 356 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Aev06g0676 356 SMART arf_sub_2 1 181 - -
Aev06g0676 356 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Aev06g0676 356 CDD HMA 183 241 IPR006121 GO:0046872
Aev06g0676 356 Gene3D - 4 183 IPR027417 -
Aev06g0676 356 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Aev06g0676 356 Pfam ADP-ribosylation factor family 5 177 IPR006689 GO:0003924|GO:0005525
Aev06g0676 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 180 IPR027417 -
Aev06g0676 356 PANTHER ADP-RIBOSYLATION FACTOR A1F 1 180 - -
Aev06g0676 356 TIGRFAM small_GTP: small GTP-binding protein domain 16 152 IPR005225 GO:0005525
Aev06g0676 356 SMART rab_sub_5 18 180 - -
Aev06g0676 356 SUPERFAMILY HMA, heavy metal-associated domain 195 242 IPR036163 GO:0046872
Aev06g0676 356 SMART sar_sub_1 1 177 IPR006689 GO:0003924|GO:0005525
Aev06g0676 356 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 180 IPR024156 GO:0005525
Aev06g0676 356 Gene3D - 184 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0676 Aev-Chr6 4620072 4623902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0676 K07937 - ini:109181828 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0676 06 4620072 4623902 Aev06g0676 06 4620072 4623902 ECH