Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0667 ATGGGTACAGAGAGGAAGAGGAAGGTGAGCTTGTTCGATGTGGTAGATGACGGTGCCGCTAAGAAGATGAAATCCAATGGCGGCGCAAACAACAACGACACCAACAGCCTCATAAATCCTTGGACTGCGAGGCCTTACTCTCAGAGGTACTTCGATATTCTTGAGAAGAGGAAGACACTCCCTATCCCTCAATTTGTTTTGGACGCTGTTGAATTGGAAACACCAGATAAGCGCAGGAAGATGATGATTGCATGCACCCAGCCTCGGAGAGTGGCTGCAATGTCTGTTTCCCGGCGTGTGGCTGAAGAGATGGATGTAACTATTGGGGAAGAAGTAGGTTATAGTATCAGATTTGAAGACTGCAGTAGTGCGAAGACAGTTTTGAAGTATCTTACAGATGGTATGCTTCTAAGAGAAGCAATGACTGATCCACTTTTGGAGCGATACAAAGTAATTATTCTTGATGAGGCACATGAAAGGACTTTGGCTACAGATGTGCTGTTTGGCCTTCTGAAGGAAGTGCTTAGAAATAGACCTGACTTGAAGTTGGTTGTAATGAGTGCAACACTGGAAGCTGAAAAGTTTCAGGGCTATTTTAGTGGTGCCCCTCTTATGAAAGTTCCTGGAAGGCTACACCCAGTGGAAATTTTTTATACTCAGGAACCTGAAAGAGATTACCTGGAGGCTGCTATCAGGACGGTGGTGCAGATACACATGTGCGAACCTCCTGGAGATATACTTGTATTTTTGACGGGAGAGGAAGAGATAGAAGATGCATGCCGCAAAATAACTAAAGAAATCTCAAATATGGGAGATCAGGTGGGCCCTGTGAAAGTGGTCCCTCTATATTCTACTCTCCCCCCGGCTATGCAGCAGAAAATTTTTGAACCGCCTCCACCTCCACTGAAGGAGGATGGGCCTCCTGGAAGGAAGATTGTGGTATCAACAAACATAGCTGAAACTTCCTTGACAATTGATGGTATTGTTTATGTTATTGACCCCGGTTTTGCCAAGCAGAAGGTTTATAACCCACGAGTCCGTGTTGAGTCTTTATTAGTGTCTCCAATATCAAAAGCCAGTGCACATCAGAGATCAGGGCGTGCTGGAAGAACTCAACCAGGGAAATGTTTTAGACTTTATACTGAGAAAAGTTTTAATAATGATCTACAGCCACAGACCTATCCTGAAATTTTGAGATCAAATCTTGCCAACACAGTTCTTACCTTGAAGAAACTGGGTATTGATGACTTAGTGCATTTTGATTTCATGGACCCTCCTGCCCCTGAGACCTTGATGCGTGCATTGGAAGTGTTGAATTACTTGGGCGCATTGGATGATGAAGGCAACTTAACAAAGCTGGGTGAAATCATGAGTGAATTTCCCTTGGATCCACAGATGTCAAAGATGCTTGTTGTTAGTCCTGAATTCAACTGTTCAAATGAGATTCTATCAATTTCTGCCATGCTTTCAGTACCCAATTGCTTTGTCCGGCCTAGAGATGCACAGAAAGCTGCGGATGAAGCTAAAGCTAGGTTTGGGCACATTGACGGGGATCATCTCACACTCTTGAATGTCTACCATGCATACAAGCAAAATAATGAGGATCCTTCTTGGTGCTACGATAACTTTGTTAATCAAAGAGCGCTGAAATCAGCTGATAATGTTAGACAACAACTAGTGCGTATCATGGCCCGGTTTAACCTCAAGTTGTGCAGCACTGACTTCAATAGCCGTGACTACTACATCAACATAAGAAAGGCTATGCTAGCTGGATACTTCATGCAGGTCGCTCATCTGGAGCGTACAGGACATTACTTGACAGTGAAAGACAACCAGGTGGTGCATTTGCATCCATCAAATTGCCTGGACCACAAGCCTGAATGGGTCATCTATAATGAATATGTTCTTACTAGTCGGAATTTTATACGTACTGTGACCGACATACGTGGGGAGTGGTTGGTTGATATAGCATCACACTACTATGATTTGTCAAATTTTCCACAATGCGAGGCCAAGCGCGTTCTTGAGAAACTTTACAAGAAGAGAGAGAGGGAAAAGGATGAAGCCAGGAGGCCAAAATGA 2082 0.4395 MGTERKRKVSLFDVVDDGAAKKMKSNGGANNNDTNSLINPWTARPYSQRYFDILEKRKTLPIPQFVLDAVELETPDKRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKITKEISNMGDQVGPVKVVPLYSTLPPAMQQKIFEPPPPPLKEDGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPRDAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNQRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLSNFPQCEAKRVLEKLYKKREREKDEARRPK* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0667 693 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 584 660 IPR011709 -
Aev06g0667 693 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 58 208 IPR014001 -
Aev06g0667 693 Pfam Helicase associated domain (HA2) 434 522 IPR007502 GO:0004386
Aev06g0667 693 CDD SF2_C_RHA 212 380 - -
Aev06g0667 693 Pfam Helicase conserved C-terminal domain 237 371 IPR001650 -
Aev06g0667 693 SMART helicmild6 254 372 IPR001650 -
Aev06g0667 693 SMART ultradead3 39 217 IPR014001 -
Aev06g0667 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 581 IPR027417 -
Aev06g0667 693 Gene3D - 417 526 - -
Aev06g0667 693 PANTHER ATP-DEPENDENT RNA HELICASE 58 691 - -
Aev06g0667 693 PANTHER ATP-DEPENDENT RNA HELICASE 1 62 - -
Aev06g0667 693 SMART ha2_5 433 523 IPR007502 GO:0004386
Aev06g0667 693 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 233 413 IPR001650 -
Aev06g0667 693 PANTHER PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DEAH3-RELATED 58 691 - -
Aev06g0667 693 PANTHER PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DEAH3-RELATED 1 62 - -
Aev06g0667 693 Gene3D - 58 210 IPR027417 -
Aev06g0667 693 Gene3D - 211 393 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0667 Aev-Chr6 4573971 4577784 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0667 K12820 - gmx:100807162 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0667 06 4573971 4577784 Aev06g0667 06 4573971 4577784 ECH