Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0615 ATGCAACTCTGCTTTCAGAACTTTCTTGCCCCTTTCCTGTTCCAACTCCTTGCTGCTCCTCTGGGAATCCGGAAGACACACATGAAGGGGCTAGTGTCTGTGCTTTTACTTATAGCATTAAGCACTGCTCTGGAGATCAATGGAGAAGATAACCGTGGACCATGTGAACAGAAACCATTGAATGCTAGGCCTCACAGCGTGTCGATCTTGGAATTTGGGGCGGTTGGAGATGGAAAAACATTGAACACAGTAGCATTCCAAAATGCTATATTTTATCTCAAGTCATTCACTGACAAAGGTGGTGCTCAACTATATGTTCCATCTGGCAAATGGCTAACTGGAAGTTTTAACCTTACTAGCCACCTCACTCTCTTCCTTGAAAGAGGCGCTACCATCATCGCATCCCAGGATTTCGCTCATTGGGATGTCGTGGATTCCCTCCCTTCTTATGGTAGAGGAATTGACGTTCCAGGTGGGAGATATCGCAGCTTGATTTATGGACAGAATTTAAGTGATGTGGTGATTACAGGTGATAGTGGAATTATTGATGGTCAGGGCTCTATCTGGTGGGACCTGTTCAATTCTCATTCCCTAAACCTCAGCAGACCACATCTTGTAGAATTTGTTAATTCTGTTAATGTCACAATTTCCAATTTGACATTTTTAAACTCTCCTGCTTGGGACATCCATCCGGTATATTGCAGCAATGTCCAAATTCTGAACATAACGACCCGTGCACCAGCTGAATCTCCTTACACAAGTGGTATAGTTCCAGATTCTTCTCAGTATGTTTGCATTGAAAAGAGTAACATCAGTTCTGGTCACGATGCAATTGTGCTGAAGAGTGGTTGGGATCAGTATGGAATTGCCTATGGAAAGCCGACATCAGGTGTCCACATCAGGGATGTTTACCTACAATCATCATCAGGTGCTGGCCTCGCATTTGGGAGCGAGATGTCCGGTGGTATATCTGATATAACTGCTGAACAGGTTCATATACTCAACTCACATATTGGCATTGAACTGAAGACGACTATCGGTAGAGGTAGCTATATGAAAGACGTCTTGATTTCTGATGCAGAATTGGTAAACATTGACTTGGGTATCAGAGTTGCTGGAGACACTGGTTTCCATCCAGATGACAAGTATGATCCAAGTGAACTTCCATTTGTTGATAGCATTACTTTTAAGAATATGATTGGTTCAAATATCACTGTCTCCGGGAACTTTTCAGGACTAGTTGAATCACCATTCACGAAAATATGTCTTTCAAACGTGAATTTTTCTGTCAGCTCTGAGCCATCCTCTTCATGGTTCTGCTCTAATGTAAAGGGTTTCTCTGAGGAGGTGTTCCCTGAGCCTTGTCCTGAACTCCAGAGCTCGTATTCCGAGTTTTCTTCTTGCTTTTCCTCCCTATACTCACTCTCTAGTTATGTCTCAAGCTCATTCGATCCTCATCATCAACAACCACAAGAGTCATAG 1482 0.4312 MQLCFQNFLAPFLFQLLAAPLGIRKTHMKGLVSVLLLIALSTALEINGEDNRGPCEQKPLNARPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFTDKGGAQLYVPSGKWLTGSFNLTSHLTLFLERGATIIASQDFAHWDVVDSLPSYGRGIDVPGGRYRSLIYGQNLSDVVITGDSGIIDGQGSIWWDLFNSHSLNLSRPHLVEFVNSVNVTISNLTFLNSPAWDIHPVYCSNVQILNITTRAPAESPYTSGIVPDSSQYVCIEKSNISSGHDAIVLKSGWDQYGIAYGKPTSGVHIRDVYLQSSSGAGLAFGSEMSGGISDITAEQVHILNSHIGIELKTTIGRGSYMKDVLISDAELVNIDLGIRVAGDTGFHPDDKYDPSELPFVDSITFKNMIGSNITVSGNFSGLVESPFTKICLSNVNFSVSSEPSSSWFCSNVKGFSEEVFPEPCPELQSSYSEFSSCFSSLYSLSSYVSSSFDPHHQQPQES* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0615 493 PANTHER PECTIN LYASE-RELATED 32 474 - -
Aev06g0615 493 PANTHER POLYGALACTURONASE-RELATED 32 474 - -
Aev06g0615 493 SUPERFAMILY Pectin lyase-like 59 460 IPR011050 -
Aev06g0615 493 Gene3D - 54 449 IPR012334 -
Aev06g0615 493 SMART pbh1 323 344 IPR006626 -
Aev06g0615 493 SMART pbh1 295 317 IPR006626 -
Aev06g0615 493 SMART pbh1 211 236 IPR006626 -
Aev06g0615 493 SMART pbh1 352 373 IPR006626 -
Aev06g0615 493 SMART pbh1 261 282 IPR006626 -
Aev06g0615 493 Pfam Glycosyl hydrolases family 28 139 444 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0615 Aev-Chr6 4253212 4256297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0615 28 470 Glycoside Hydrolase AT3G16850 60.360 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0615 - - aip:107645668 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0615 06 4253212 4256297 Aev06g0615 06 4253212 4256297 ECH