Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0573 ATGGCAATGGGAGTGGTTGCAGTTGGTGTGCAGCAACAGTTCCTTAGGTACTCAGAATCATCAAAGTATTGGAATAGAACAAGAAGCCCATGCCTTCCTCTTTACAGTTCCATTCTCTTACGGTCACACAAAAAGATTCAATTTTCAGTGATTTCTTGCTCTTCTTCTTCTTCTTCGTCCTCACCGCAGACCCCAGAAGCTGAGACTCAAATTCAAACTGCTGAATCTTGTGTTAATTTGGGTCTTCAGCTATTCTCCAAAGGAAAGGTTAAAGATGCATTAGTCCAGTTCGAAACAGCGCTTTCTTTGAATCCCAATCCTGTGGAGGCCCAAGCTGCTCTCTATAACAAAGCTTGCTGCCATGCATACAGAGGGGAAGGAAAGAAAGCTGCTGATTGTCTACGCACTGCTTTGAGGGAATACAACCTAAAATTCGGTACAATTCTCAATGATCCAGACTTGGCCTCCTTCAGAGCTTTGCCTGAATTCAAAGAGCTACAAGAAGAGGCCAGGCTGGGTGGGGAAGATATTGGCTACAGTTTTCGGAGAGATCTAAAACTTATTAGTGAAGTTCAAGCACCATTTCGTGGGGTCAGAAAATTCTTTTATGTAGCACTGTCGGCAGCTGCAGGAATTTCATTGTTATTTACTATTCCCAGGCTGTTTCGTGCAATTAGTGGCGGAGATGATGCACCTGATCTATTGGCAACTGCTGGGAATGCTGCCATTAATATTGGAGGTATTGTTGTTCTCGTGGCATTATTCTTCTGGGACAATAAAAAAGAGGAGGAGCAGATTGCACAAATATCCCGAAATGAGACACTATCAAGGTTGCCTTTGCGCTTATCAACTAATCGCATAGTTGAACTTGTTCAGCTGCGGGACACAGTTAGGCCGGTTATTTTAGCAGGAAAAAAAGAAACAGTATCCTCCGCTTTGCAAAGAGCAGAAAGATTTCGCACTGAGCTCCTTAAACGTGGTGTACTGTTAGTTCCTGTCATATGGGGAGAAGGTAAGGAGACAAAACTTGAGAAGAAAGGTTTTGGTCGTCCACGAAAGGCTGCTGAAGCTCTTCCATCTATTGGGGAAGATTTTGAGAAGCGAGCACAGTCCATAACTGCAAAATCAAAGCTGCAAGCCGAAATTAGATTCAAGGCTGAAGTTATATCACCAGCCGAATGGGAACAGTGGATTAGAGAACAGCAGAAGTCTGAAGGAGTTACTGAAGGCGAAGATGTGTACATAATACTGCGACTAGATGGGCGAGTTCGAAGATCAGGGAAAGGTATGCCTGACTGGCAGCAAATTCTTCAGGAGCTGCCTCCAATGGAAGCATTTTTAAGCAAGCTTGAAAGATGA 1359 0.4386 MAMGVVAVGVQQQFLRYSESSKYWNRTRSPCLPLYSSILLRSHKKIQFSVISCSSSSSSSSPQTPEAETQIQTAESCVNLGLQLFSKGKVKDALVQFETALSLNPNPVEAQAALYNKACCHAYRGEGKKAADCLRTALREYNLKFGTILNDPDLASFRALPEFKELQEEARLGGEDIGYSFRRDLKLISEVQAPFRGVRKFFYVALSAAAGISLLFTIPRLFRAISGGDDAPDLLATAGNAAINIGGIVVLVALFFWDNKKEEEQIAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVILAGKKETVSSALQRAERFRTELLKRGVLLVPVIWGEGKETKLEKKGFGRPRKAAEALPSIGEDFEKRAQSITAKSKLQAEIRFKAEVISPAEWEQWIREQQKSEGVTEGEDVYIILRLDGRVRRSGKGMPDWQQILQELPPMEAFLSKLER* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0573 452 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 13 452 - -
Aev06g0573 452 SMART tpr_5 111 144 IPR019734 GO:0005515
Aev06g0573 452 SMART tpr_5 74 107 IPR019734 GO:0005515
Aev06g0573 452 Pfam Low psii accumulation1 / Rep27 182 259 IPR021883 -
Aev06g0573 452 Gene3D Tetratricopeptide repeat domain 43 160 IPR011990 GO:0005515
Aev06g0573 452 ProSiteProfiles TPR repeat profile. 74 107 IPR019734 GO:0005515
Aev06g0573 452 SUPERFAMILY TPR-like 70 140 IPR011990 GO:0005515
Aev06g0573 452 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 13 452 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0573 - - gmx:100784188 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0573 06 4028697 4031768 Aev06g0573 06 4028697 4031768 ECH