Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0557 ATGGGACTTGTAACTGTTGGTGAATTGAAGCCTTGTATTTCTTCAGGGAAAAGGAGCTTTCGCCCAAGTTCAAGCATAAGACATGCTTCTGAATGGCCAATATCTGATGTCTCTAGTGATCTTACTATTGAAGTAGGAGAATCAAGCTTTGCACTTCACAAGTTTCCTCTAGTTTCTAGGAGTGGAAGAATTAGGAAACTTCTGCTAGAAGCAAAAGATTCAAAAGTTTTGCGCATAAGTCTCCAAAATGTGCCTGGTGGTCCAGTTGCATTTGAGCTAGCTGCAAAATTCTGCTATGGAATCAATGTTGAGTTCACTCTGTCAAATGTTGCCATGCTTCGTTGCACGGCGAAATTCCTCGAAATGACCGAAGAATTTGCAGAGAAAAACTTGGAGACAAGAGCAGAATTATATCTGAGGGACACAGTTCTAACTAGTATACCAAACACAATATCAGTTCTTCACCATTGTGAGACTCTTCTTCCCATGTCAGAAGAAATTAACCTTGTAACAAGGCTAATCAATGCGATCGCCAATAATGCGTGCAAAGAACAACTTACCTCTGGCTTGCTAAAACTTGACCACAATTTCCCTTCAAAAACCTTATCAAAGATGGGACAGGAAACACCATCGGATTGGTGGGGGAAATCTTTCAATGTTCTTGGTCTTGATTTCTTCCAGAGAGTTATATCAATGTTGAAGTCAAAGGGACTAAAACAAGACATGATCAGTAAGATTTTGATAAACTATGCTCATAATTCTCTTAATGGAATTGGTGTTAGGGATTCCAGTTTGGTCAGAGGAAGCCTAGTTGACTTGGAAATGCAGAAGAAACAAAGGCTCATTGTTGAATCCATAGTTAACTTGCTCCCTAATCAATCAAGGAAAAGCGCGGTTCCGATGGCGTTTCTCTCTTGTTTGTTGAAGGCTGCAATGGCAGCATCAACATCAACTCATTGTAGATCTGAATTGGAGAGGCGAATCGGCCTACAACTCGACCAGGCGATTCTAGAAGACATCCTAATTCCAGCAAATTCACCTCAAAATTCTCACGGCACAATGTATGACACGGAATCCATCTTGAGGATCTTTTCGATTTTTCTGAATTTGGATGATGCAGAGGATGAGGAAGATAGCCACTTCAGAGATGAAAGCCAAATGGTGTACGACTTTGACAGCCCTGGATCACCGAAACAAAGCTCAATTCTTAAGGTATCCAAACTAATGGACAATTACCTCGCTGAAATAGCACTAGACTCAAACTTGTCACCATCAAAATTCACATCACTTGCAGAGCTACTTCCAGATCATGCACGTATAGTAAGCGATGGACTCTACAGAGCTGTTGATATCTTCCTTAAGGTTCATCCGAATATAAGGGACTCGGAGCGATACCGGCTATGCAAAACCATCGATTGCCAGAAACTATCACAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGATTGCCGGTGCAGATGGCAGTGCAAGTACTCTACTTCGAGCAAATCCGGCTTCGCAACGCGATGAACGGAGGAATTCATAACAGCGGCTTCTTCTTCGGCGGTAACCACTTCCCTCAACGTTCAGGAAGCAGTGCAGGGAGTGGTGCTATCTCACCAAGAGACAACTATGCATCAGTGAGAAGAGAGAACAGAGAATTGAAGCTTGAGGTTGCAAGGATGAGAATGAGGCTAACTGATCTGGAGAAAGATCATGTTTGTATGAAGCAAGAGCTTGTGAAGTCTAATCCTGCAAACAAGATATTCAAATCATTCACAAAGAAACTTAGCAAGCTCAATTCTCTGTTTAGGATGAACAATGTTAAGACATTTGGTGGCAAATCTAGTTCTGAAACCAGGTTCCCTTTTCCGAAGAGAAGGCGTCACTCAGTTTAA 1899 0.4202 MGLVTVGELKPCISSGKRSFRPSSSIRHASEWPISDVSSDLTIEVGESSFALHKFPLVSRSGRIRKLLLEAKDSKVLRISLQNVPGGPVAFELAAKFCYGINVEFTLSNVAMLRCTAKFLEMTEEFAEKNLETRAELYLRDTVLTSIPNTISVLHHCETLLPMSEEINLVTRLINAIANNACKEQLTSGLLKLDHNFPSKTLSKMGQETPSDWWGKSFNVLGLDFFQRVISMLKSKGLKQDMISKILINYAHNSLNGIGVRDSSLVRGSLVDLEMQKKQRLIVESIVNLLPNQSRKSAVPMAFLSCLLKAAMAASTSTHCRSELERRIGLQLDQAILEDILIPANSPQNSHGTMYDTESILRIFSIFLNLDDAEDEEDSHFRDESQMVYDFDSPGSPKQSSILKVSKLMDNYLAEIALDSNLSPSKFTSLAELLPDHARIVSDGLYRAVDIFLKVHPNIRDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGIHNSGFFFGGNHFPQRSGSSAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVCMKQELVKSNPANKIFKSFTKKLSKLNSLFRMNNVKTFGGKSSSETRFPFPKRRRHSV* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0557 632 Coils Coil 545 572 - -
Aev06g0557 632 Gene3D Potassium Channel Kv1.1; Chain A 25 145 IPR011333 -
Aev06g0557 632 Pfam NPH3 family 212 481 IPR027356 -
Aev06g0557 632 PANTHER OS12G0117600 PROTEIN 26 626 IPR043454 -
Aev06g0557 632 Pfam BTB/POZ domain 38 124 IPR000210 GO:0005515
Aev06g0557 632 ProSiteProfiles BTB domain profile. 39 107 IPR000210 GO:0005515
Aev06g0557 632 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 26 626 - -
Aev06g0557 632 SMART BTB_4 39 131 IPR000210 GO:0005515
Aev06g0557 632 ProSiteProfiles NPH3 domain profile. 212 505 IPR027356 -
Aev06g0557 632 SUPERFAMILY POZ domain 22 124 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0557 Aev-Chr6 3898945 3902609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0557 1 455 EF-hand Containing Proteins AT2G47860 57.320 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0557 - - gmx:100776688 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0557 06 3898945 3902609 Aev06g0557 06 3898945 3902609 ECH
Aev06g0557 06 3898945 3902609 Aev02g0558 02 4302021 4307538 PCT