Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0550 ATGAGGTGTTCACTTGGTTGTATTGGTTCTCCAGCTGTTAATTCAGATGTGCAATTTTCGCAACCTTGCTCTAATAAGGAAATTTCCCGCAGAGTCTCAGAGCGGTGGACACGAGCTATCATGGCTGAAGGAGAGGAGCGCATTGAGCTTAAATTCCGCATATATGATGGAACAGATATAGCACACAGTACTTATATACCATCTACTACAGTTGGTACCCTTAAGCAAAGGCTAATTGCTGAGTGGCCTCAAGGCAAAACAGTTACACCAAAGTCAGTAAGTGACATAAAACTTATTCATGCTGGTAAAGTTTTGGAAAACAGCAAAACACTTTCTGACTCCAGAATAACTTTTGGTGACATTCCTGGGGGTGCTATTACCATGCATGTAGTAGTACAGCCTCCAGTAGCTAAAAAGAAGACAGAGAAGAACCAGGATGGCAAGAAAAAGATGAATTCATGCTCATGCACTATCCTTTAG 480 0.4167 MRCSLGCIGSPAVNSDVQFSQPCSNKEISRRVSERWTRAIMAEGEERIELKFRIYDGTDIAHSTYIPSTTVGTLKQRLIAEWPQGKTVTPKSVSDIKLIHAGKVLENSKTLSDSRITFGDIPGGAITMHVVVQPPVAKKKTEKNQDGKKKMNSCSCTIL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0550 159 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 41 159 - -
Aev06g0550 159 Gene3D - 32 141 - -
Aev06g0550 159 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 41 159 IPR040015 -
Aev06g0550 159 SUPERFAMILY Ubiquitin-like 44 138 IPR029071 -
Aev06g0550 159 CDD Ubl_MUBs_plant 48 135 - -
Aev06g0550 159 PIRSF MUB 39 159 IPR017000 -
Aev06g0550 159 PIRSF MUB 13 40 IPR017000 -
Aev06g0550 159 Pfam Ubiquitin-2 like Rad60 SUMO-like 46 157 IPR039540 -
Aev06g0550 159 ProSiteProfiles Ubiquitin domain profile. 48 116 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0550 Aev-Chr6 3873420 3875430 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0550 - - hbr:110657996 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0550 06 3873420 3875430 Aev06g0550 06 3873420 3875430 ECH