Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0544 ATGATGGGTAGCGAAGAGTCGAAGAAGGCGGGAGGGGATGATGGAGGAGTAGTGCAGAGTAGTAGTGATGTGAAGGTTGTGGAGAGGGTGATAATGAGTAGTAGGGCTCCTCCTGCTTCTGTTTCTGCTTCTGCTTATTACTACGAGTTGTTAATGAGATTGATAGGGATGTGCCTCACACTTGTGGCCACCATCATTGTGGGCGTTGACAAGCAGAGTAAGAGCATCTCCTACGCCGGTATGCACTTCCATGCCACTGCTAAGTGGCAATACATGTCTGCTACTGTGTTCTTCTTGGTATCGAATGCTATAGCATGCTCATATGCAGCTACATCCCTGGTGATGAAGATCATCATGATCTCCTCAGCAAATACGGGAATTAGCGGAACAAGAAGGAGGACGTTGGGTGTAAGCATAAGCATAGGAGATCTGATAATGATGGGACTTCTGTTCTCAGCCAATGGCGCAGCGTATGCAGTGGGACTGATAGGGAAGAACGGGAACTCACACGTGCAATGGATGAGAGTGTGCAATGTGTTCGACGCCTACTGCCGCCACGTCACCGCTGCTTTGGTCCTCTCTCTCATTGCCTCCTCCCTCTTTCTTCTCATGCTTGCCCACTCTCTTCTCAAACTCCATTCCTCCTCCTCCTCTACTCTACCTACCTAG 669 0.4948 MMGSEESKKAGGDDGGVVQSSSDVKVVERVIMSSRAPPASVSASAYYYELLMRLIGMCLTLVATIIVGVDKQSKSISYAGMHFHATAKWQYMSATVFFLVSNAIACSYAATSLVMKIIMISSANTGISGTRRRTLGVSISIGDLIMMGLLFSANGAAYAVGLIGKNGNSHVQWMRVCNVFDAYCRHVTAALVLSLIASSLFLLMLAHSLLKLHSSSSSTLPT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0544 222 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 50 211 IPR006459 -
Aev06g0544 222 Pfam Casparian strip membrane protein domain 47 198 IPR006702 -
Aev06g0544 222 MobiDBLite consensus disorder prediction 1 20 - -
Aev06g0544 222 PANTHER CASP-LIKE PROTEIN 1E1 41 215 - -
Aev06g0544 222 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 41 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0544 Aev-Chr6 3850530 3851306 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0544 - - adu:107492438 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0544 06 3850530 3851306 Aev06g0544 06 3850530 3851306 ECH