Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0500 ATGAAATTCGGGTGTGTGTTCACGGAGTACCTTCAAGAAGAGAGGGAATTGTTGTTGGACAGTAAATGTGCGCACATAGAATATGTGAGGTTGAAAAAAGTGTTGAAGAGTTGCCAGGGTGGTAAAGAATTGCCCAATTCTTCTGATTCTGATCTTCTCTCTAAAGACGAGCTGTGCCAATGTGAATCTTGCCCAGTGTGTGATCAAAAGTTCTTCTCTGAGCTGATGAAGGAAGCATCAGATATAGTGGGATACTTCAGTTCAAGAGTTAGGCATCTCCTTCATCTTCATATTGCGACGGGAATGCAGAGATATGTATTGAGCTTGCGTCAGTGCTTTAAAAACGATAGGCCAACCCTTGCACAACAGGGGAGAATCTTAATTGAGTACATTGTAATGAATGCTATTGCCATGAGGAAAATTCTTAAGAAATATGATAAAGTCCATAGCTCTGTTAATGGACAGAATTTCAAATCTAGGATGCATGCCGAACACATTGAACTTTTACACTCACCTTGGCTAATTGAATTGGGTGCTTTTTATCTGAATTCTAGCGGACTAGATGGTTGTGAGCTTGATGGAGTGTATGGTCGCTTTTCGTGTGACCTAAACCTAACTGAAGTTGTCATGACATTGGTTCTTCCAGATTCTATTAAACTTGAGTACAATCTAAATTGTGCAATTTGCCTGGATTTTGTTTTCAACCCATATGCTTTGGGTTGTGGTCATATCTTCTGCAAGTCATGCGCTTGCTCAGCTGCCTCTGTGATGATGTTCCAAGGCCTTAAAGCTGCAAGTCCAGACTCAAAGTGTCCAGTATGCAGAGAGGAGGGAGTTTATTCTAAGCCAGTGCGCATGTTAGAACTTGATCTGCTTATGAAAAGAAGGTGCAAAGAATACTGGAAAGAGAGGCTAACTGCAGAACGAAGTGAAATGGTGAAGCAATCCAAGGAATACTGGCATTTACAGTCAGCATATGCAATTGGAATTCGCTAG 996 0.4127 MKFGCVFTEYLQEERELLLDSKCAHIEYVRLKKVLKSCQGGKELPNSSDSDLLSKDELCQCESCPVCDQKFFSELMKEASDIVGYFSSRVRHLLHLHIATGMQRYVLSLRQCFKNDRPTLAQQGRILIEYIVMNAIAMRKILKKYDKVHSSVNGQNFKSRMHAEHIELLHSPWLIELGAFYLNSSGLDGCELDGVYGRFSCDLNLTEVVMTLVLPDSIKLEYNLNCAICLDFVFNPYALGCGHIFCKSCACSAASVMMFQGLKAASPDSKCPVCREEGVYSKPVRMLELDLLMKRRCKEYWKERLTAERSEMVKQSKEYWHLQSAYAIGIR* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0500 331 SMART ring_2 226 274 IPR001841 -
Aev06g0500 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 213 326 IPR013083 -
Aev06g0500 331 Pfam RING-type zinc-finger 226 272 IPR027370 -
Aev06g0500 331 ProSiteProfiles SPX domain profile. 1 159 IPR004331 -
Aev06g0500 331 ProSiteProfiles Zinc finger RING-type profile. 226 275 IPR001841 -
Aev06g0500 331 CDD SPX_BAH1-like 2 155 - -
Aev06g0500 331 ProSitePatterns Zinc finger RING-type signature. 241 250 IPR017907 -
Aev06g0500 331 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 329 IPR033326 -
Aev06g0500 331 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED 1 329 - -
Aev06g0500 331 SUPERFAMILY RING/U-box 218 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0500 Aev-Chr6 3616266 3618691 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0500 K16275 - gmx:100781704 550.821