Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0487 ATGGATTCCTCCATCTATGGTGTCTGTACAACCAAACCCTTCTCCTTCTTCCTCACTGCCCTCCTCCTCTTCCTCTTCCCGCTCCATTCCCATTCTGCAAACTCAACCACTGGTCAAATCAACTCCAACTCCATCCTCGTTGCTCTTCTCGATTCCCACTACACTGAACTCGCTGAGCTCGTAGAAAAGGCCCTTCTCCTTCAGAAGCTTGAAGACGCTGTCGGCAACCACAACATCACCATCTTCGCGCCACGAAACCAAGCACTCGAACGCGACCTCGACCCTGAGTTCAAGCGCTTCCTCCTCGAACCCCGCAATCTCCGCTCCCTCCAAACTCTCCTCATGTCCCACATTCTCCCCACTCGCATCTCCTCCTCCGCCTGGCCCTCCTCCCAAACATACTCCGCCCGCCACCACACCCTCTCCACCGACCACCATCTCCACCTAATTACTAACTTTTCCGGCCATAGAACCGTCGACTCCGCCGCCGTTATCCGCGCCGACGACGTCCTCCGTCCCGACGGTGTCATCCACGGGATCGAGCGCCTCATCGTCCCGAGATCCGTCCAGGAGGACTTCAACCGCCGCCGCAGCCTCCGCTCCATCGCGGCGGTGATCCCGGAGGGAGCTCCGGAGGTGGATCCGCGAACTCACCGTCTCAAGAAGCCGGCTCCAGTCCCCGCCGGAGCTCCACCCGTGCTCCCGATCTACGACGCGTTGGCACCTGGACCAGCCATATCTCCGGCACCAGCGCCAGGTCCCGGCGGCCCCCACGGCCACTTCAACGGAGAGCGCCAGGTCCGTGACTTCATCCAGACGCTCCTGCATTACGGCGGTTACAACGAGATGGCGGACATTCTGGTAAATCTGACGTCACTCGCGACGGAGATTGGGCGGTTGGTGTCGGAAGGCTACGTCCTAACGGTTCTGGCTCCGAACGACGAAGCTATGGCGAAGCTCACGACGGATCAATTGAGCGAACCGGGTGCACCGGAGCAGATTATATACTACCATATCATACCGGAGTACCAGACGGAGGAGAGTATGTACAATGCGGTTAGAAGGTTCGGGAAGATTCGATATGACACGCTGAGGTTGCCGCATAAAGTGGTGGCTCAGGAAGCTGATGGGTCTGTGAAGTTCGGGCACGGTGATGTGTCTGCTTATCTGTTTGATCCTGATATTTATACCGATGGCAGGATCTCTGTTCAGGGGATTGATGGGGTTCTTTTCCCCTTGGAGGAATTGGAAGACGATAGTAAGGCTCAACGCAGAACCACCCCCCTTGTTAAAGTTGCTGCTAAACCCAGGAGAGGGAAATTGCTGGAAGTCGCATGTAGCATGCTTGGAGCTTTTGGCCAAGTCTGCTAA 1371 0.5697 MDSSIYGVCTTKPFSFFLTALLLFLFPLHSHSANSTTGQINSNSILVALLDSHYTELAELVEKALLLQKLEDAVGNHNITIFAPRNQALERDLDPEFKRFLLEPRNLRSLQTLLMSHILPTRISSSAWPSSQTYSARHHTLSTDHHLHLITNFSGHRTVDSAAVIRADDVLRPDGVIHGIERLIVPRSVQEDFNRRRSLRSIAAVIPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDALAPGPAISPAPAPGPGGPHGHFNGERQVRDFIQTLLHYGGYNEMADILVNLTSLATEIGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKIRYDTLRLPHKVVAQEADGSVKFGHGDVSAYLFDPDIYTDGRISVQGIDGVLFPLEELEDDSKAQRRTTPLVKVAAKPRRGKLLEVACSMLGAFGQVC* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0487 456 SUPERFAMILY FAS1 domain 247 413 IPR036378 -
Aev06g0487 456 ProSiteProfiles FAS1/BIgH3 domain profile. 41 184 IPR000782 -
Aev06g0487 456 SUPERFAMILY FAS1 domain 43 187 IPR036378 -
Aev06g0487 456 Pfam Fasciclin domain 291 411 IPR000782 -
Aev06g0487 456 Pfam Fasciclin domain 53 186 IPR000782 -
Aev06g0487 456 Gene3D FAS1 domain 287 412 IPR036378 -
Aev06g0487 456 Gene3D FAS1 domain 45 186 IPR036378 -
Aev06g0487 456 ProSiteProfiles FAS1/BIgH3 domain profile. 267 410 IPR000782 -
Aev06g0487 456 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 1 454 - -
Aev06g0487 456 SMART fasc_3 308 413 IPR000782 -
Aev06g0487 456 SMART fasc_3 80 187 IPR000782 -
Aev06g0487 456 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 454 IPR044654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0487 Aev-Chr6 3526039 3528845 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0487 - - gmx:100800956 687.182