Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0482 ATGACCCGTTTTTACGAGAAGATCCGTTTGCGTTCGCTGCTGCTGAAACCGACCCGCTTTCTCGCTCTAGTTTCTCTCTCCACCCTCAACCTCTGCAAGTCCCTCGCTCGCTTCCTCCTCTCCCAAACCCTACCTTTCCTCTCCATGGATAACCTCTTCGCCGATCACTCCGACTTCTTCTCCGACGACTTCGATTCCTCCTCCTACCACCTCCGCCCTCACCGCCGCTCCTTCCACGACGCCGACCGCGATCAACCCGACGAGAGGGTTTACTTGCTCCCCTACAGATGGTTGATTGAGGCGGAAGGTGTAGGTGATCGTGTGGAAGGTGTGTTGTACACAGTGTCGTCGAATTCCGATTACGACTCTGAGATTTTGCTTCATTTGAGGAAGGAAGAGGACCGCGAGAAGATTAGGGATTTGGAGGTAGGGTTTTCAGGTCGCCAATATGCCCTGGTTCCTGAAGGGATTTGGTTGCGTGCACTCAAACGGTATAATGACTTCAATAATGCTGCGGAAGATTTTGGGAGCCTCATCTTTTCAGAACACTGTTTGGCTGATTTATTCCCCTTGCAAGTTAGGATTTTTGTTTCATGGGAAACAAATTCGCTGGTGGCAAAGATAAGCCAAAAGGAAAATGTGGCCGAGTTTTACAAAAAAGCTTGTCACATATTCAATTCTGAGCTTGATCCAGTGCATATTTGGGACTTTTCGGGGCAGACAACCCAGTTATTCATGAATGACCAAGTTCGGTTGCCAAATGATTCTGCTAGTCAACCTGGAAGAGAGGTTCTTCTGGAGTTGCAAGTTCATGGACTTTCAGATTCCATGCATGGTAATGGAAGTAATGAGATGATTGCAGATAGGTCTCAGACGGAATGTTCTTCTCACAGTGGTTCAGTTATAATGAATGGATGCACTGACAATGTGATCTCTAATGTATCGGCAGCAACAAACTCCTTTCGCTGCAGTAGCTATCGAGCAGTTTGTACTTTGGGTTTGACAGGATTACAGAATCTTGGGAATACTTGTTTCATGAATAGTGCTATTCAGTGTTTGGCTCATACACCTAAGCTTGTTGATTTTTTCCTTGGAGACTACCGTAAAGAGATAAATTATGAAAATCCCTTGGGAATGAATGGAGAACTTGCTTTAGCTTTTGGAGATTTACTGAGAAGGCTGTGGGTGCCTGGAGCAAGGCCTGTGGCACCAAGAATGTTCAAGATGAAACTTGCTAATTTTGCTCCTCAGTTTAGTGGATATAGCCAGCATGACTCTCAAGAGCTTCTTGCCTTTCTGTTGGATGGTCTGCATGAAGACCTCAATCGTGTAAAACGCAAGCCATATCATGAAGTTAAGGATGCAGATGGCCGCCCAGATGAAGAAGTGGCTGAAGAGTACTGGCGAAATCACCTTGCTCGCAATGACTCCATAGTAGTTGATTTGTGCCAAGGTCAGTTTCGATCTACATTGGTTTGCCCTATCTGCAAGAAGGTCTCTATCACATTTGACCCTTTTATGTATTTATCTCTTCCTTTGCCTTCCACAACAATGCGGACCATGACTTTGACTGTCATGAGCACTGATGGGATTACAGTGCCTAATACATGTACTGTAACACTGCCTGAAAGTGGAACACTTAAGGATCTTATTGCGGCCTTGAGTGCTTGTTGTTCTCTTAGAGATGATGAAACCCTCTTGGTGGCTGAGATATACAAGAATCGGATTTTTCGGCAATTTGAGGATCCATCCGATTCATTATCCGAAATTAGAGATATGGACAAACTTGTTGCCTATAGAACACAAAAATATAACGAAGATTGTCCCTTGGTTATTTTCTCACATGATCGTTTGGTGGAAATTTCTGAGCAGGACAGGTTCGAAACTCAATTGTTTGGTATTCCACTGGTAACAAGGTTGTCCAGTATTTATTGTGGAAATGATATTCGTAAGGAGTTTCTGAAGCTAATCTATCCATTTCTGAGGCATTCGGAGGATAAATTAGATAAGGTTGATAATGATAATGATGCCAATAAAAAACTTAGTGAAGATGATGAATTGGTCGATACTACTAGCTCTGCAGCAATAGGAAGTGATGCAGACACAACCTGTGGAACGGAGGAATGCACACAGTTGTGGGCTGACTTTGAATTCTACTTACCCTCTGTGCATGGAATAGAGAATGTAAAGATAAATTTGAACGAACCATTACCTGTCACAAGGTTGCCTGTGAAGCTGGATGTGATTGTCTTATGGTCAGATAAGATGATTAAGAAATATGATACTTGCCTGCTTGACACATTACCTGAGGTTTTCAGGCCCCAGCTGTCCACCAAGAGAACACAAGAATCTGTTTCTATTTACAAATGCCTTGAAGCCTTTTTGAAAGAGGAGCCTCTAGGGCCAGAAGACATGTGGTACTGCCCTACATGCAAAAAACCTCAGCAAGCAACTAAAAAATTAGATCTCTGGAGATTGCCCGAAATCCTTGTTGTTCATTTGAAGAGGTTTTCATATAGCCGATTCTTCAAGAACAAGCTTGAAACATTTGTAGACTTCCCCATTGATGATCTGGACGTTTCATCTTACGTAGCCCACCAGAACAATCAGTCCTCCAACCGCTACATGTTGTATGCTATCAGTTGTCACTATGGAGGGTTAGGAGGAGGCCACTATACAGCATTTGTCCGTTATGGCCATGATAAATGGTATGAGTTCGATGATAGCAGGGTTGGCCCTGCAAGTGAGGACATGATAAAGACTTGTGCTGCTTATGTGCTTTTCTACAGGAAAGTTTAG 2799 0.4366 MTRFYEKIRLRSLLLKPTRFLALVSLSTLNLCKSLARFLLSQTLPFLSMDNLFADHSDFFSDDFDSSSYHLRPHRRSFHDADRDQPDERVYLLPYRWLIEAEGVGDRVEGVLYTVSSNSDYDSEILLHLRKEEDREKIRDLEVGFSGRQYALVPEGIWLRALKRYNDFNNAAEDFGSLIFSEHCLADLFPLQVRIFVSWETNSLVAKISQKENVAEFYKKACHIFNSELDPVHIWDFSGQTTQLFMNDQVRLPNDSASQPGREVLLELQVHGLSDSMHGNGSNEMIADRSQTECSSHSGSVIMNGCTDNVISNVSAATNSFRCSSYRAVCTLGLTGLQNLGNTCFMNSAIQCLAHTPKLVDFFLGDYRKEINYENPLGMNGELALAFGDLLRRLWVPGARPVAPRMFKMKLANFAPQFSGYSQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDADGRPDEEVAEEYWRNHLARNDSIVVDLCQGQFRSTLVCPICKKVSITFDPFMYLSLPLPSTTMRTMTLTVMSTDGITVPNTCTVTLPESGTLKDLIAALSACCSLRDDETLLVAEIYKNRIFRQFEDPSDSLSEIRDMDKLVAYRTQKYNEDCPLVIFSHDRLVEISEQDRFETQLFGIPLVTRLSSIYCGNDIRKEFLKLIYPFLRHSEDKLDKVDNDNDANKKLSEDDELVDTTSSAAIGSDADTTCGTEECTQLWADFEFYLPSVHGIENVKINLNEPLPVTRLPVKLDVIVLWSDKMIKKYDTCLLDTLPEVFRPQLSTKRTQESVSIYKCLEAFLKEEPLGPEDMWYCPTCKKPQQATKKLDLWRLPEILVVHLKRFSYSRFFKNKLETFVDFPIDDLDVSSYVAHQNNQSSNRYMLYAISCHYGGLGGGHYTAFVRYGHDKWYEFDDSRVGPASEDMIKTCAAYVLFYRKV* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0482 932 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 336 351 IPR018200 GO:0004843|GO:0006511
Aev06g0482 932 Pfam Ubiquitin carboxyl-terminal hydrolase 335 929 IPR001394 GO:0004843|GO:0016579
Aev06g0482 932 Gene3D Cysteine proteinases 603 932 - -
Aev06g0482 932 Gene3D Cysteine proteinases 323 561 - -
Aev06g0482 932 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 335 932 IPR028889 -
Aev06g0482 932 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 875 892 IPR018200 GO:0004843|GO:0006511
Aev06g0482 932 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 51 932 - -
Aev06g0482 932 SUPERFAMILY Cysteine proteinases 333 931 IPR038765 -
Aev06g0482 932 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 51 932 - -
Aev06g0482 932 CDD Peptidase_C19R 777 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0482 Aev-Chr6 3487748 3493230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0482 783 932 Miscellaneous Gene Families AT2G24640 32.026 9.71e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0482 - K21343 cam:101507058 1424.45