Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0437 ATGGCTTCAATTACCAAGAGGCTGGAAGGTAAAGTGGCAATAATCACAGGAGGTGCAAGCGGAATTGGTGCAACGACAGCAAAAGTATTCGTTAAACATGGTGCTAAAGTAATTATTGCAGATGTCCAAGACGAACTAGGCATGTCCCTATGCAAAAGCCTTAGTGCCACCAATAATAATAATGTTCTCTACGTTCACTGCGATGTAACTTCTGAATCAGACATCGAAAATGTGGTTGACGTGGCAGTGTCCAAGCACGGCAAACTTGACATCATGTATAACAATGCTGGAATCTCAGGGCAGTACGACCCCAACTCCAACAATTCAATTTTGGCTTCCGGTAACCAAGATTTCAAAAGTGTTCTTGATGTCAACGTTTATGGAGCATTTTTGGGAGCCAAGCATGCTGCTAGGGTCATGATCCCAAAAAAGAAAGGTGTCATTCTGTTTACATCGAGCATTTGTTCGATTATTGGTGGCGAGGCAAGCCATGCTTACACTGCGTCAAAGCATGCAGTGGTGGGACTTATGAAGAACCTGTGTGTTGAGTTAGGACAACATGGAATCAGAGTTAACTGCATTGCTCCCGGAGGAATTCCAACTCCGATGCTAAACAATGCATTCAAGATGAACAAGAATGAGACTCAGGACTTGCTCTCTTCTGCTGCAGTGTTGAAACAGGGCGTTCTTGAGGCAGAGGACATAGCTGAAGCAGCGGTTTACTTGAGTAGCGATGAGGCTAAGTTCGTGAGTGGAGTCAACTTGGTGTTGGATGGAGGTTACACTACAACAAATATGTCATTGGCTTTGGCATTCAAAGGTTTGGTGATGGACCCAAACAACAATCACATAGTACATTAA 861 0.439 MASITKRLEGKVAIITGGASGIGATTAKVFVKHGAKVIIADVQDELGMSLCKSLSATNNNNVLYVHCDVTSESDIENVVDVAVSKHGKLDIMYNNAGISGQYDPNSNNSILASGNQDFKSVLDVNVYGAFLGAKHAARVMIPKKKGVILFTSSICSIIGGEASHAYTASKHAVVGLMKNLCVELGQHGIRVNCIAPGGIPTPMLNNAFKMNKNETQDLLSSAAVLKQGVLEAEDIAEAAVYLSSDEAKFVSGVNLVLDGGYTTTNMSLALAFKGLVMDPNNNHIVH* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0437 286 PRINTS Glucose/ribitol dehydrogenase family signature 12 29 IPR002347 -
Aev06g0437 286 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Aev06g0437 286 PRINTS Glucose/ribitol dehydrogenase family signature 166 185 IPR002347 -
Aev06g0437 286 PRINTS Glucose/ribitol dehydrogenase family signature 140 156 IPR002347 -
Aev06g0437 286 PRINTS Glucose/ribitol dehydrogenase family signature 187 204 IPR002347 -
Aev06g0437 286 PRINTS Glucose/ribitol dehydrogenase family signature 87 98 IPR002347 -
Aev06g0437 286 Pfam Enoyl-(Acyl carrier protein) reductase 17 262 - -
Aev06g0437 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 IPR002347 -
Aev06g0437 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 IPR002347 -
Aev06g0437 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 IPR002347 -
Aev06g0437 286 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 263 IPR036291 -
Aev06g0437 286 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 2 271 - -
Aev06g0437 286 Gene3D - 2 276 - -
Aev06g0437 286 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 153 181 IPR020904 GO:0016491
Aev06g0437 286 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-RELATED 2 271 - -
Aev06g0437 286 CDD secoisolariciresinol-DH_like_SDR_c 7 262 IPR045309 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0437 Aev-Chr6 3138794 3140107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0437 8 260 Acyl Lipid Metabolism Gene Families AT3G12800 34.457 2.86e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0437 - - aprc:113863381 406.757