Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0423 ATGGATTCCATGGAAGTTGAGTTGAGCACACAAAGTCGCGGTTCAGAGAAGAAAGAACAAGAAGAACAAGAACAAGGCGTCCACACGTACGTGGCAGCGTGGCCAATTTCGTGTGTAGGATGGTCAATGCGGCGCGACAAATCCCCACGCCTGGCCATCGCTAGCTACTTGGAAGAATACACCAACAAGGTGGAACTCGTTCACTTCAACTACGACACCTTCAATTTCACCACTGACCCTCGTTTGGTCCTCGACCACCCTCACGCCCCAACCAACCTCATGTTCTTCCCCTCCGAGGACCCCTCCAACCCCGACTTCCTTGCCACCTCAGGCGACAACCTCAGACTCTGGCAAATCCACGACGACCACATTCACCTCAAGTCCCTCTTAGTTGGCAACAAAGTCACCGACCACTCCGCCATTACGTCTTTCGATTGGGCCACGTTTGACGCGCGTTATGTTGCCACGTGTAGCGTCGACACCACGTGCACCGTATGGGACATAGAGAGGGAACTCATGAACGCGCAACTCGTGGCGCATGACAAGGAGGTGTACGACATTTCGTGGGGTGGGTTTAATGTGTTTGCTTCGGTGTCCGGTGATGGTTCAATCAGGGTGTTTGATTTGAGGGATAAGGAAAAATCTACGATAATTTATGAGAATCCGGTGCAGGATTGCCCGTTGTTGCGTTTGGAATGGAATAAAGGGGATGCAAGGTTTATGGCAACGGTTGGGATGAATAGTAATAAGGTTGTGGTTATGGATATTAGGCAACCAACCACGCCTTTTATGGAGTTATCTAAGCATAGGACGAGTGTTAATGCTGTATCGTGGTCCCCTGAAATCGGACGGCATTTGTGCTCTGCTAGTGATGACTCAACGGCTCTGATTTGGGAGGTGATGGATACGGGCAATGTTGGTGCTGGTGACGTGGAGCCGTTGATGTGGTATGGATCGACGGCTGAGCTCAATCATGTGTGTTGGTCTCCTGTGCAGTGGGATTGGATTGCACTTACTTTCATGAATAATTTGCAGCTACTCAAGGTGTAG 1050 0.5038 MDSMEVELSTQSRGSEKKEQEEQEQGVHTYVAAWPISCVGWSMRRDKSPRLAIASYLEEYTNKVELVHFNYDTFNFTTDPRLVLDHPHAPTNLMFFPSEDPSNPDFLATSGDNLRLWQIHDDHIHLKSLLVGNKVTDHSAITSFDWATFDARYVATCSVDTTCTVWDIERELMNAQLVAHDKEVYDISWGGFNVFASVSGDGSIRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKGDARFMATVGMNSNKVVVMDIRQPTTPFMELSKHRTSVNAVSWSPEIGRHLCSASDDSTALIWEVMDTGNVGAGDVEPLMWYGSTAELNHVCWSPVQWDWIALTFMNNLQLLKV* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0423 349 PANTHER WD REPEAT CONTAINING PROTEIN 20 349 IPR045159 -
Aev06g0423 349 Gene3D - 2 346 IPR015943 GO:0005515
Aev06g0423 349 PANTHER WD REPEAT-CONTAINING PROTEIN LWD1-LIKE 20 349 - -
Aev06g0423 349 SMART WD40_4 77 118 IPR001680 GO:0005515
Aev06g0423 349 SMART WD40_4 128 167 IPR001680 GO:0005515
Aev06g0423 349 SMART WD40_4 259 299 IPR001680 GO:0005515
Aev06g0423 349 SMART WD40_4 170 208 IPR001680 GO:0005515
Aev06g0423 349 MobiDBLite consensus disorder prediction 11 25 - -
Aev06g0423 349 MobiDBLite consensus disorder prediction 1 26 - -
Aev06g0423 349 SUPERFAMILY WD40 repeat-like 34 339 IPR036322 GO:0005515
Aev06g0423 349 ProSiteProfiles Trp-Asp (WD) repeats profile. 177 217 IPR001680 GO:0005515
Aev06g0423 349 Pfam WD domain, G-beta repeat 263 298 IPR001680 GO:0005515
Aev06g0423 349 Pfam WD domain, G-beta repeat 177 208 IPR001680 GO:0005515
Aev06g0423 349 Pfam WD domain, G-beta repeat 136 167 IPR001680 GO:0005515
Aev06g0423 349 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 300 IPR001680 GO:0005515
Aev06g0423 349 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 300 - -
Aev06g0423 349 ProSitePatterns Trp-Asp (WD) repeats signature. 286 300 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0423 Aev-Chr6 3054934 3055983 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0423 K11805 - zju:107416321 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0423 06 3054934 3055983 Aev06g0423 06 3054934 3055983 ECH