Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0410 ATGGAGGCCGTGCACTTTTCTGCTGTTGCCTCCCGCCATTTCTCCACTGCTTCTGCTCCTTCCCTCTCTCAGAACCGAACCTTGTGCTCTTCTTCCTCTCTCAAACCAACTAAGCTTTCCTCTCCCTGGACCGGTTCAACCACACCCACTTCCTTTTCTTCCAGAAACTTGTTCACGAATGAGATATGGAGTTGGGTGAACTCCAAGAGCGTGGCTATGAGAAGGGATATGCGCGGTGTGGTGAGGGCTGAGATGTTTGGGCAGTTGACCAGTGGCCTTGAGGCTGCCTGGAACAAGCTCAAAGGAGAAGAGGTTTTGACCAAAGAGAATATTGTGGAGCCTATGCGTGATATTAGGAGAGCTCTTTTGGAAGCAGATGTTAGCCTTCCTGTTGTGAGAAGGTTTGTGCAAGCTGTCAGTGATCAGGCTGTGGGTGTTGGCGTCATTCGAGGAGTGAGACCAGATCAGCAGTTGGTTAAGATTGTACGTGATGAACTAGTAAAATTGATGGGTGGAGAGGTTGCTGAACTGGTTTTTGCCAAATCAGGGCCCACTGTAATTTTACTGGCTGGACTACAGGGAGTTGGGAAAACAACTGTCTGTGCCAAATTGTCAAATTATCTCAAGAAACAGGGGAAGAGTTGCATGTTAGTTGCTGGAGATGTTTACAGACCTGCCGCTATTGATCAACTTGCTATTTTGGGTAAACAGGTGGATGTGCCTGTCTATACAGCAGGTACTGATGTTAGACCTTCAGAAATTGCTAAACAAGGTTTAGAAGAGGCAAAAAAGAAGAACATTGATGTGGTTATTGTTGACACAGCCGGTAGGCTGCAGATAGACAAAGCCATGATGGATGAGTTAAAAGAAGTGAAGCGGGCATTGAATCCAACAGAAGTTTTGCTAGTTGTGGATGCCATGACAGGGCAAGAAGCAGCTGCCCTGGTGACTACTTTCAATCTTGAGATTGGAATAACGGGTGCCATCTTGACAAAGCTAGATGGTGATTCAAGAGGTGGGGCAGCTTTGAGTGTCAAAGAGGTATCTGGAAAGCCAATCAAGCTGGTAGGACGGGGGGAACGCATGGAGGATCTTGAACCTTTCTACCCTGATCGAATGGCAGGACGCATATTAGGAATGGGAGATGTTCTTTCATTTGTAGAGAAGGCACAAGAAGTTATGCAACAAGAAGATGCTGAGGAACTGCAAAAGAAGATCATGAGTGCAAAGTTTGACTTCAATGATTTTCTAAAGCAAACTCGTGCCGTTGCACGAATGGGTTCAGTGTCTCGTGTGCTTGGAATGATTCCTGGTATGGGAAAGGTTACTCCAGCTCAAATTCGAGATGCAGAGAAGAATTTGAAGCAAATGGAAGCAATGATAGAAGCAATGACCCCTGAGGAGAGGGAAAAGCCAGAACTATTGGCAGAATCACCTGTCAGAAGGAAGAGAATCGCCCAGGATTCGGGTAAAACAGAGCAGCAGGTAAGCCAACTTGTAGCTCAGCTGTTCCAAATGCGCGTTCGAATGAAGAATCTGATGGGTGTAATGCAAGGTGGATCACTTCCAACACTTAGTAATCTTGAGGAAGCGCTTAAAACAGATGAAAAGGCTCCTCCTGGTACTGCAAGGAGGAAGAAGAGATCGGAGTCGAGGAAACAGTTCGCAGACTCAGCATCAGCAAGGCCAGCTCCTCGCGGTTTTGGGAGCAAAAACGTTGTGGCGGAGCTGAATCCAGGGATAAATACCAGTGTTCAAGTTGATCCTATATCATCTGAGGTAGCAGCCACCAAGGAAATGAAGGAACAAGCTGAAGCTGCAAGGAAGAAGAAGGAAAGGGAAAAGAAGGAAGCATTGCAAACACTAAAATCAGCCATTATAATTTCAGGCATAGTTGTGGCTGTGGTTGGTGCTGCCTTTGCTATAACCAAGAAGCTAAGAGAGAAATGA 1950 0.4631 MEAVHFSAVASRHFSTASAPSLSQNRTLCSSSSLKPTKLSSPWTGSTTPTSFSSRNLFTNEIWSWVNSKSVAMRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVRDELVKLMGGEVAELVFAKSGPTVILLAGLQGVGKTTVCAKLSNYLKKQGKSCMLVAGDVYRPAAIDQLAILGKQVDVPVYTAGTDVRPSEIAKQGLEEAKKKNIDVVIVDTAGRLQIDKAMMDELKEVKRALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSVSRVLGMIPGMGKVTPAQIRDAEKNLKQMEAMIEAMTPEEREKPELLAESPVRRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQGGSLPTLSNLEEALKTDEKAPPGTARRKKRSESRKQFADSASARPAPRGFGSKNVVAELNPGINTSVQVDPISSEVAATKEMKEQAEAARKKKEREKKEALQTLKSAIIISGIVVAVVGAAFAITKKLREK* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0410 649 Coils Coil 447 467 - -
Aev06g0410 649 Gene3D - 174 368 IPR027417 -
Aev06g0410 649 CDD SRP_G 185 377 - -
Aev06g0410 649 SMART AAA_5 183 330 IPR003593 -
Aev06g0410 649 MobiDBLite consensus disorder prediction 531 555 - -
Aev06g0410 649 Pfam SRP54-type protein, helical bundle domain 89 166 IPR013822 GO:0005525|GO:0006614
Aev06g0410 649 Hamap Signal recognition particle 54 kDa protein [srp54]. 89 529 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Aev06g0410 649 Gene3D - 390 514 IPR036891 GO:0006614|GO:0008312|GO:0048500
Aev06g0410 649 MobiDBLite consensus disorder prediction 23 49 - -
Aev06g0410 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 437 IPR027417 -
Aev06g0410 649 PANTHER SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 60 572 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Aev06g0410 649 SMART SRP54_3 184 379 IPR000897 GO:0005525|GO:0006614
Aev06g0410 649 PANTHER BNAC02G02820D PROTEIN 60 572 - -
Aev06g0410 649 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 352 365 IPR000897 GO:0005525|GO:0006614
Aev06g0410 649 Pfam Signal peptide binding domain 410 508 IPR004125 GO:0006614|GO:0008312|GO:0048500
Aev06g0410 649 SMART SRP54_N_2 85 170 IPR013822 GO:0005525|GO:0006614
Aev06g0410 649 TIGRFAM ffh: signal recognition particle protein 87 511 IPR004780 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Aev06g0410 649 MobiDBLite consensus disorder prediction 468 489 - -
Aev06g0410 649 Pfam SRP54-type protein, GTPase domain 184 379 IPR000897 GO:0005525|GO:0006614
Aev06g0410 649 Gene3D - 88 389 IPR042101 -
Aev06g0410 649 MobiDBLite consensus disorder prediction 531 569 - -
Aev06g0410 649 Coils Coil 594 621 - -
Aev06g0410 649 MobiDBLite consensus disorder prediction 468 492 - -
Aev06g0410 649 SUPERFAMILY Signal peptide-binding domain 410 511 IPR036891 GO:0006614|GO:0008312|GO:0048500
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0410 Aev-Chr6 2982902 2988831 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0410 K03106 - mnt:21402095 966.837