Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0345 ATGGATCGGCTTTCTTCCAGCACTGTTATACCGGACGCGTTTCAAGGAGCAAAAGATGACATGACCATGCAGCTGGCATTCATATGGGGCCAAATCAAGGCACCATTGATCGTGCCATTGCTGAGAATATCGGTGTTCCTCTGCCTGATCATGTCGGTGATGATGTTCATAGAGCGGGTGTACATGGGCATTGTCATCACCTTGGTCAAGCTGTTTGGGAGAAAGCCAGAGAAGCGTTACAAATGGGAGCCAATGAAGGACGATCTTGAGTTAGGAAACTCTTCTTACCCAATGGTTCTCGTTCAAATCCCCATGTACAACGAAAGAGAGGTTTATCAGCTTTCAATTGGAGCTGCTTGTGGACTTTCTTGGCCTTCAGACAGGATCATCGTACAAGTTCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTGCAATTAGAATGCCAAAGATGGGCAAGTAAAGGAGTGAACATAAAGTATGAGGTTAGGGACAACAGGAACGGGTACAAAGCAGGGGCTCTGAAAGAAGGAATGAAGAGAAGCTATGTTAAGCTATGCGATTACGTTGCTATTTTTGACGCTGATTTTCAGCCAGAGCCTGATTTCTTGTGGCGCACAGTTCCATTCCTCGTGCACAATCCTCAACTAGCCCTTATTCAGGCTCGATGGAAATTCGTGAATTCCGATGAATGCTTGATGACCAGGATGCAAGAGATGTCACTGGATTACCATTTTACGGTTGAACAAGAAGTGGGCTCTTCCACTTACGCCTTCTTTGGTTTCAATGGGACTGCGGGAGTATGGAGAATTGCGGCGTTGAATGAGGCTGGCGGGTGGAAAGATAGGACCACTGTGGAAGATATGGACCTTGCTGTCCGAGCTAGTCTTAAAGGATGGAAATTCTTATACTTGTCCAACTTGAAGGTTAAAAATGAGTTGCCAAGTACTTTCAAGGCCTACCGCTACCAACAGCACCGATGGTCTTGTGGGCCAGCCAATCTTTTCAGGAAAATGGTTATGGAGATCATGGCAAACAAGAAAGTGACATTGTGGAAGAAGATCCATGTGATATACAGCTTCTTCTTTGTTCGGAAGGTTGTAGCACACATCAACACGTTTGTGTTTTATTGCATTGTATTGCCTGCAACTGTTTTGGTGCCTGAGGTTGCGGTCCCCAAATGGGGTGCTGTCTATATCCCCTCTGTCATCACCATTCTTAATGCAGTTGGAACTCCAAGGTCACTCCATTTACTTGTTTTTTGGATTCTCTTTGAGAATGTCATGTCTTTACATCGAACCAAGGCAACAATTATTGGCCTGCTAGAGGCTAGCCGAGTGAATGAATGGGTTGTCACTGAAAAACTTGGTGAAGCTCTCAAGACTAAGGCAGGGGCTAAAGCACCCAAGAAGCCTAGATTCAAGATTGGCGACAGGATTCACTTGTTAGAACTTGGTGTCGGATTCTACCTCTTCTTTGTCGGTTGCTACGATGTTATGTTCGGGAAAAACCACTTCTTCATCTTCCTTTTCATCCAAGCAATTGCTTTCTTCATCATGGCATTTGGATATGTTGGCACCTTTGTTCCCAACTCATAG 1602 0.4513 MDRLSSSTVIPDAFQGAKDDMTMQLAFIWGQIKAPLIVPLLRISVFLCLIMSVMMFIERVYMGIVITLVKLFGRKPEKRYKWEPMKDDLELGNSSYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIIVQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKLCDYVAIFDADFQPEPDFLWRTVPFLVHNPQLALIQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIMANKKVTLWKKIHVIYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVAVPKWGAVYIPSVITILNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWVVTEKLGEALKTKAGAKAPKKPRFKIGDRIHLLELGVGFYLFFVGCYDVMFGKNHFFIFLFIQAIAFFIMAFGYVGTFVPNS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0345 533 PANTHER - 1 532 - -
Aev06g0345 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 373 IPR029044 -
Aev06g0345 533 Pfam Glycosyltransferase like family 2 98 332 - -
Aev06g0345 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 532 - -
Aev06g0345 533 CDD CESA_CaSu_A2 97 333 - -
Aev06g0345 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 312 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0345 Aev-Chr6 2521675 2526517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0345 1 532 Miscellaneous Gene Families AT5G03760 81.238 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0345 K13680 - gmx:100810016 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0345 06 2521675 2526517 Aev02g2274 02 23725248 23728364 PCT