Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0330 ATGCGGGGTTGCGTTCCCGTGTTGTTGGCCTTAGCCGCCGTGGTGGCGGTGGTTCCGGCGACGGTGGTGTTGCCGGGGAGTTTCCTTTCCCTGGAGCGTGCCATTCCGCTGAACCACCGCGTCGAGCTGGAGGAGCTGAGAGCTCGCGACGGAGCACGGCACCGTCGAATCTTGCTAGGCGCGGTTGGCGGCATCGTCGACTTCTCAGTCCAAGGAACCTCCGATCCTTACTTCGTTGGGTACGGGTTGTATTTCACTAAAGTGAAGATGGGTTCTCCTCCTAGGGAATTCAACGTCCAGATTGATACTGGAAGTGACATCTTGTGGGTGAATTGCAATACTTGCAATAATTGTCCACACTCTAGTGGCCTGGGGATTCAGCTCAATTTCTTTGATGCTGCCAGCTCATCCACGGCTTCACTAGTTTCTTGCTCTGACCCAATATGCAGTTATGCGGTTCGAACCGCGACGAGTGAGTGCTCGTCTCAGGTTAATCAGTGCAGCTACACCTTTCAGTATGGAGACGGAAGTGAGACATCTGGTTATTATGTTTCTGATTCTATGTATTTTGACACGGTCGTGGGACAGTCTTTTCTTTCGAACTCATCATCTACAGTCGTTTTTGGGTGTAGCACCTTTCAGTCGGGAGATCTAGCGAAGACAGAAAAAGCAGTTGACGGAATTTTTGGATTCGGCCCTGGTGCTCTGTCTGTTATATCACAATTGTCATCACAAGGCATGACACCCAAAGTTTTCTCTCATTGCTTAAAAGGAGATGGCAGTGGAGGAGGCATACTAGTTCTTGGTGAGATTTTGGAGCCAAGTATTGTTTATAGTCCGCTTGTTCCATCACAGCCCCATTACAACTTAAATCTTGAGAGCATTGCGGTTAATGGACAACTCCTATCAATTGACCCAGCTGCATTTGCAACATCGAACAACCGAGGAACTATAGTTGACTCTGGTACAACATTGGCATACCTTGTTCAAGAAGCTTATGATCCTTTTGTCAATGCTATAACTACCACCGTGTCACAGTTTGCCCGGCCCATAATTTCTAAAGGAAACCAGTGTTTTCTGGTCCCAACCAGCTTAGGTGGTATATTTCCTCCAGTCAGTTTAAACTTCATGGGTGGAGCATCCATGGCTTTAAAACCAGAACAATACCTTATGCATTATGGTTTCCTTGATGGGGCGGCAATGTGGTGCATTGGTTTCCAGAAAGTGCAGGAGGGATTCACAATTTTAGGAGATCTTGTGCTAAAAGATAAGATTGTTGTATACGACTTGGCTAATCAACGAGTTGGATGGACCGACTATGATTGTTCCTTATCAGTAAACGTCTCGATGGATACGAGCAAGAGCAAGGATCAGTACATCAATGCAGGGCAGCTGAGTGTCAGCAGCTCCCAAACAGGCATTGTCCACAAGTTGCTACATTCGTCGTCATGCCTCAATTCCTAA 1464 0.474 MRGCVPVLLALAAVVAVVPATVVLPGSFLSLERAIPLNHRVELEELRARDGARHRRILLGAVGGIVDFSVQGTSDPYFVGYGLYFTKVKMGSPPREFNVQIDTGSDILWVNCNTCNNCPHSSGLGIQLNFFDAASSSTASLVSCSDPICSYAVRTATSECSSQVNQCSYTFQYGDGSETSGYYVSDSMYFDTVVGQSFLSNSSSTVVFGCSTFQSGDLAKTEKAVDGIFGFGPGALSVISQLSSQGMTPKVFSHCLKGDGSGGGILVLGEILEPSIVYSPLVPSQPHYNLNLESIAVNGQLLSIDPAAFATSNNRGTIVDSGTTLAYLVQEAYDPFVNAITTTVSQFARPIISKGNQCFLVPTSLGGIFPPVSLNFMGGASMALKPEQYLMHYGFLDGAAMWCIGFQKVQEGFTILGDLVLKDKIVVYDLANQRVGWTDYDCSLSVNVSMDTSKSKDQYINAGQLSVSSSQTGIVHKLLHSSSCLNS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0330 487 PRINTS Pepsin (A1) aspartic protease family signature 90 110 IPR001461 GO:0004190|GO:0006508
Aev06g0330 487 PRINTS Pepsin (A1) aspartic protease family signature 317 328 IPR001461 GO:0004190|GO:0006508
Aev06g0330 487 PRINTS Pepsin (A1) aspartic protease family signature 414 429 IPR001461 GO:0004190|GO:0006508
Aev06g0330 487 Gene3D Acid Proteases 271 448 IPR021109 -
Aev06g0330 487 Pfam Xylanase inhibitor C-terminal 287 438 IPR032799 -
Aev06g0330 487 Gene3D Acid Proteases 68 270 IPR021109 -
Aev06g0330 487 ProSiteProfiles Peptidase family A1 domain profile. 84 438 IPR033121 -
Aev06g0330 487 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 6 458 - -
Aev06g0330 487 SUPERFAMILY Acid proteases 79 445 IPR021109 -
Aev06g0330 487 CDD pepsin_A_like_plant 84 442 IPR034161 -
Aev06g0330 487 Pfam Xylanase inhibitor N-terminal 84 269 IPR032861 -
Aev06g0330 487 PANTHER ASPARTYL PROTEASES 6 458 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0330 Aev-Chr6 2421802 2425459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0330 82 443 Miscellaneous Gene Families AT1G44130 28.646 1.18e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0330 - - gmx:100804147 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0330 06 2421802 2425459 Aev06g0330 06 2421802 2425459 ECH
Aev06g0330 06 2421802 2425459 Aev02g2228 02 23362795 23366125 PCT