Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0306 ATGACTTCATCATTGCTCTTTGCTCTTGTTATTGTTGTTGCATATGCACTTCCTCATGTGCATGCAGACATGGATAACTCCTCCTCATCTGACATAGTGGAACATAGAAAATTGGTGGATACAAAGAATCAACATCACCCAGATTTTGCACCTGGCCCCTGGACGCAAGCTCATGCTACCTTCTATTCAGGAGGTTCTGGAACATATGGAGGAGCTTGTGGGTATGAGGACGTGGTGAAAGATGGTTATGGGGATGAGACAGCAGCATTGAGCACAGTAATGTTCAAGCAAGGTGAGTCATGCGGTGCATGTTACGAGATCAAATGTGTTGACTCTCCTCAAGGCTGCAAGAAAGGTGGACCACCCTCCATATTTGTCACCGCCACAAATCTCTGCCCTCCAAGCAATCAACCAAGTGACAATGGTGGATGGTGCAACCCTCCTCGGGAGCACTTTGATTTGTCCACTTCTGCATATCTCAAGATTGCTGAATATAAGGCTGGCATCGTCCCCGTCCAATACCGCAGGATCCCATGCAAGAAGACAGGAGGTATTAAGTTCACCATAACAGGGAACCCATACTTCAATCTAGTCAAAGTGTGGAATGTAGGGGGTGCAGGGGATGTGGTGGGAGTTCAGGTGAAGGGTGATAGCAAGCTCAACTGGACAGATTTGCAGAGGAATTGGGGTCAGAAATGGCAGACTAATGCTAAGTTAGTGGGAGAATCATTGAGCTTCAGGGTCAGAACTAGTGATGGCAGGTCCTCCACCTCATTGCGTGTTGCTCCCAACAATTGGCAGTTTGGTCAGACTTTTGAAGGCAAAAACTTCAACTAA 837 0.4707 MTSSLLFALVIVVAYALPHVHADMDNSSSSDIVEHRKLVDTKNQHHPDFAPGPWTQAHATFYSGGSGTYGGACGYEDVVKDGYGDETAALSTVMFKQGESCGACYEIKCVDSPQGCKKGGPPSIFVTATNLCPPSNQPSDNGGWCNPPREHFDLSTSAYLKIAEYKAGIVPVQYRRIPCKKTGGIKFTITGNPYFNLVKVWNVGGAGDVVGVQVKGDSKLNWTDLQRNWGQKWQTNAKLVGESLSFRVRTSDGRSSTSLRVAPNNWQFGQTFEGKNFN* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0306 278 PRINTS Expansin/Lol pI family signature 222 236 IPR007118 GO:0005576
Aev06g0306 278 PRINTS Expansin/Lol pI family signature 167 183 IPR007118 GO:0005576
Aev06g0306 278 PRINTS Expansin/Lol pI family signature 91 109 IPR007118 GO:0005576
Aev06g0306 278 PRINTS Expansin/Lol pI family signature 260 274 IPR007118 GO:0005576
Aev06g0306 278 PRINTS Expansin/Lol pI family signature 53 68 IPR007118 GO:0005576
Aev06g0306 278 PANTHER EXPANSIN-A32 25 278 - -
Aev06g0306 278 SUPERFAMILY Barwin-like endoglucanases 53 202 IPR036908 -
Aev06g0306 278 PRINTS Expansin signature 195 216 IPR002963 GO:0009664
Aev06g0306 278 PRINTS Expansin signature 82 96 IPR002963 GO:0009664
Aev06g0306 278 PRINTS Expansin signature 124 134 IPR002963 GO:0009664
Aev06g0306 278 PRINTS Expansin signature 183 195 IPR002963 GO:0009664
Aev06g0306 278 PRINTS Expansin signature 142 159 IPR002963 GO:0009664
Aev06g0306 278 PRINTS Expansin signature 159 172 IPR002963 GO:0009664
Aev06g0306 278 PRINTS Expansin signature 231 252 IPR002963 GO:0009664
Aev06g0306 278 PRINTS Expansin signature 260 276 IPR002963 GO:0009664
Aev06g0306 278 SMART dpbb_1 87 174 IPR007112 -
Aev06g0306 278 Pfam Lytic transglycolase 87 174 IPR009009 -
Aev06g0306 278 Pfam Expansin C-terminal domain 185 263 IPR007117 -
Aev06g0306 278 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 194 274 IPR007117 -
Aev06g0306 278 PANTHER EXPANSIN-A15 25 278 IPR002963 GO:0009664
Aev06g0306 278 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 70 184 IPR007112 -
Aev06g0306 278 SUPERFAMILY PHL pollen allergen 181 274 IPR036749 -
Aev06g0306 278 Gene3D - 183 277 IPR036749 -
Aev06g0306 278 Gene3D - 38 180 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0306 Aev-Chr6 2287533 2289197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0306 41 277 Miscellaneous Gene Families AT5G02260 64.730 2.08e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0306 - - gmx:100800424 397.897