Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0305 ATGGTGAAAGCCTACCCCCGGTACGAGCAGAAGTCGTCGTTCGGCGTTATCGCCTCCGTAGACTCCAACATCGCCTACGACAGCTCCGGCAAGCACCTCCTTTCTCCGGCGCTCGAAAAAATCGGCGTCTGGCACGTACGCCAGGGCATATGCACCAAAACCCTACCCTCTTCTACTGACTCTGACTCTCCCTCTTCTACTGAATCTACTTCTTCTACTGTCTCTCTCAGCCTCTCCGTCGCCGTCACCTCCATCGCCCCCTCCCCCTCCTCCTCCCAGGTAGCTGCTGGTTATGCTGACGGTAGCATAAGGATTTGGGACTCTGATGCGGGAACTTGCGAGACCACTTTGAATGGACACAAAGGAGCTGTTACTGCTCTTCGCTACAACAAGTCTGCCTCCTTGCTCGCTTCTGGGAGTAAGGACAATGATGTCATTTTATGGGATGCGGTTGGCGAGGTTGGCCTGTTTCGCCTTCGAGGCCACCGGGATCAGGTGACTGATGTTGTTTTTGTGGGGTCTGGGAAAAAGCTGGTTAGTTCTTCTAAGGACAAGTTTTTGAGAGTGTGGGATCTTGATACCCAGCACTGTATGCAAATTGTTGGTGGTCATCATAGTGAAATTTGGTCTGTAGACGTTGATCCGGATGAAAGGTACCTTGTCACTGGTTCTGCGGACAAGGAGCTTCGGTTTTATTCAATTAAGCCAGAGTCTATGGATGGGCAGCTTGTAAATGGGGACAATGCAGTGGCTGATGGTGGGGATTCTTTCGTTCAAAACAAATGGGAAGTTTTGAGGCAGTTTGGGGAGATTCAGCGGCAAAGCAAGGAAAGAGTTGCCACGGTGCAGTTCAATAAGTCTGGGAATTTGCTGGCTTGTCAAGTTGCAGGAAAGACGGTGGAAATATACCATGTTTTGGATGATGCTGAAGCAAAGCGTAGAGCAAAACGCAGGGTTCATCGCAAGAAAGAGAAGAAACATGGCAAAGAGGCTTCAGAGGGAACTGAAAATGGGAACAGGGATAATGAGGACAGAGGAGATAAGTCCTCAGGGACCAATGGACCCAGTGAAGCAAATAGCCTTGCAGTTACTGTGCCTGATGTTTTTAAGCTGCTGCACACTCTAAGAGCTAGCAAAAAGATATGTTCCATATCTTTCTGCCCAGTCACTCCAAAGAATTCACTTGCTAGTTTAGCATTGTCCTTGAACAATAATCTACTTGAGCTTTACTCCATTGAAAGTGGTGAATCCACAAAATCTCTAGCTATTGAGCTTCAAGGGCACCGTTCTGATATTAGAAGTGTGACACTTAGTTCGGACAGCACTCTTCTGATGTCAACCAGTCACAATGCAGTGAAGATTTGGAACCCGAGTACTGGATCATGCCTAAGGACAATTGATTCTGGGTATGGACTATGCAGTCTAATTCTCCCCTCTAACAAGTATGGCCTTGTTGGAACTAAAGATGGAAACTTAGAAATTATTGATATTGGAAGTGGCACTCGCCTTGAAGCAGTGGAAGCTCACGGTGCTTCTGTTCGCTCAATTGCTGCCCTACCAGATAAGAATGGTTTTGTCACAGGAAGTGCTGATCATGAAGTTAAATTCTGGCAGTACCAAATAAAGCAATTCCCAAATCAAACCACTAAGCAACTTAGCATATCAAACATCAGTACCATGAAGATGAATGATGATGTTCTAGTGGTTGCAATCAGCCCTGATTCTAAATATATTGCTGTTGCGCTGTTGGATAGTACTGTGAAGGTTCACTTTGCTGACACATTCAAATTCTTCCTGTCATTATATGGTCACAAATTGCCTGTTCTGTGTATGGATATCTCATCAGATGGAGATTTAATTGTGACTGGTTCAGCAGATAAAAATATAAAGATTTGGGGTTTGGATTTTGGTGACTGTCATAAATCCATTTTTGCTCATGCTGACAGTGTTATGGCAGTGCAATTTGTTCCAAAGACACACTACATGTTTAGTGTTGGAAAAGATCGCCTTGTAAAATATTGGGATGCTGATAAATTTGAGTTGCTGTTAACTCTTGAAGGACACCATGCAGATATCTGGTGTCTTGCAATCAGTAATATTGGTGATTTTATTGTCACTGGATCTCATGACCGTTCTATCCGCCTTTGGAAACGTACCGAACATCATTTGTTCATTGAGGAGGAAAAGGAGAAAAGGTTGGTGGAAATGTTTGATGCTGATCTTGACAGTGCTTTTGAGAATAAACATATACCAAAAGAAGAAATACCGGAGGAGGGAGCTGTGGCTATTGCCGGAAAAAGAACTGATGAAACCCTTACTAAAACTGACGAAATTATTGAAAGTTTAGATATAGCCGAAGCTGAACAAAAGCGTATTGCTGAACATCAGGAGGAGGAGAAAAATAATGGTAATGTTGCTGCATTCCAAGCAAATCTGATTATGCTGGGCCTTTCCCCTTCTGATTATGTTCTAAGAGCATTTTCGGATGTTCACTCCAATGATCTTGAGCAAACACTATTGGCTTTACCTTTTTCAGATGCTTTGAAGCTTCTGTCATACTTGAAAGATTGGATTTCATATTCTGATAAGGTTGAGCTTGTTTGCCGAATAGGAACAGTACTGTTGCAAACACATTACCACCAGCTGCTTACCACGCCAGCTGCCAGACCTATCTTGACCGTTTTCAGTGACATTTTCTATGAACGTGTCAAGGAATGGAAAGATATTTTTGGTTTTAATCTTGCAGCCATGGATCATATCCAGCAAATGATGGCTTCGAGATCCGATGCAGTTTTTAGTGATGCGAGATCGAAACTGCTGGAGATTCGTGCTAAACAATCTAAACGTTTAGCAGACAGGTCTGATACCGGAGAAGGGAAGAGAAAGAAGAAGAAGAAGACGTAA 2904 0.4387 MVKAYPRYEQKSSFGVIASVDSNIAYDSSGKHLLSPALEKIGVWHVRQGICTKTLPSSTDSDSPSSTESTSSTVSLSLSVAVTSIAPSPSSSQVAAGYADGSIRIWDSDAGTCETTLNGHKGAVTALRYNKSASLLASGSKDNDVILWDAVGEVGLFRLRGHRDQVTDVVFVGSGKKLVSSSKDKFLRVWDLDTQHCMQIVGGHHSEIWSVDVDPDERYLVTGSADKELRFYSIKPESMDGQLVNGDNAVADGGDSFVQNKWEVLRQFGEIQRQSKERVATVQFNKSGNLLACQVAGKTVEIYHVLDDAEAKRRAKRRVHRKKEKKHGKEASEGTENGNRDNEDRGDKSSGTNGPSEANSLAVTVPDVFKLLHTLRASKKICSISFCPVTPKNSLASLALSLNNNLLELYSIESGESTKSLAIELQGHRSDIRSVTLSSDSTLLMSTSHNAVKIWNPSTGSCLRTIDSGYGLCSLILPSNKYGLVGTKDGNLEIIDIGSGTRLEAVEAHGASVRSIAALPDKNGFVTGSADHEVKFWQYQIKQFPNQTTKQLSISNISTMKMNDDVLVVAISPDSKYIAVALLDSTVKVHFADTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNIKIWGLDFGDCHKSIFAHADSVMAVQFVPKTHYMFSVGKDRLVKYWDADKFELLLTLEGHHADIWCLAISNIGDFIVTGSHDRSIRLWKRTEHHLFIEEEKEKRLVEMFDADLDSAFENKHIPKEEIPEEGAVAIAGKRTDETLTKTDEIIESLDIAEAEQKRIAEHQEEEKNNGNVAAFQANLIMLGLSPSDYVLRAFSDVHSNDLEQTLLALPFSDALKLLSYLKDWISYSDKVELVCRIGTVLLQTHYHQLLTTPAARPILTVFSDIFYERVKEWKDIFGFNLAAMDHIQQMMASRSDAVFSDARSKLLEIRAKQSKRLADRSDTGEGKRKKKKKT* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 117 149 - -
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 117 149 IPR001680 GO:0005515
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 643 684 IPR001680 GO:0005515
Aev06g0305 967 Gene3D - 72 326 IPR015943 GO:0005515
Aev06g0305 967 MobiDBLite consensus disorder prediction 946 967 - -
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 506 538 IPR001680 GO:0005515
Aev06g0305 967 PANTHER WD REPEAT CONTAINING PROTEIN 3 WDR3 1 966 - -
Aev06g0305 967 Coils Coil 306 326 - -
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 685 717 - -
Aev06g0305 967 Gene3D - 468 667 IPR015943 GO:0005515
Aev06g0305 967 PRINTS G protein beta WD-40 repeat signature 620 634 IPR020472 -
Aev06g0305 967 PRINTS G protein beta WD-40 repeat signature 704 718 IPR020472 -
Aev06g0305 967 PRINTS G protein beta WD-40 repeat signature 178 192 IPR020472 -
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 425 465 IPR001680 GO:0005515
Aev06g0305 967 SUPERFAMILY WD40 repeat-like 81 304 IPR036322 GO:0005515
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 201 235 - -
Aev06g0305 967 MobiDBLite consensus disorder prediction 313 359 - -
Aev06g0305 967 SMART WD40_4 459 496 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 636 675 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 499 538 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 194 233 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 678 717 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 152 191 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 261 304 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 48 107 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 594 633 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 110 149 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 418 456 IPR001680 GO:0005515
Aev06g0305 967 SMART WD40_4 553 591 IPR001680 GO:0005515
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 643 675 - -
Aev06g0305 967 ProSitePatterns Trp-Asp (WD) repeats signature. 178 192 IPR019775 -
Aev06g0305 967 MobiDBLite consensus disorder prediction 326 350 - -
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 685 717 IPR001680 GO:0005515
Aev06g0305 967 Gene3D - 356 467 IPR015943 GO:0005515
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 159 200 IPR001680 GO:0005515
Aev06g0305 967 CDD WD40 421 717 - -
Aev06g0305 967 Pfam WD domain, G-beta repeat 158 191 IPR001680 GO:0005515
Aev06g0305 967 Pfam WD domain, G-beta repeat 424 456 IPR001680 GO:0005515
Aev06g0305 967 Pfam WD domain, G-beta repeat 680 717 IPR001680 GO:0005515
Aev06g0305 967 Pfam WD domain, G-beta repeat 111 149 IPR001680 GO:0005515
Aev06g0305 967 Pfam WD domain, G-beta repeat 599 632 IPR001680 GO:0005515
Aev06g0305 967 Pfam WD domain, G-beta repeat 507 537 IPR001680 GO:0005515
Aev06g0305 967 Pfam WD domain, G-beta repeat 196 232 IPR001680 GO:0005515
Aev06g0305 967 Pfam WD domain, G-beta repeat 82 107 IPR001680 GO:0005515
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 506 538 - -
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 82 116 IPR001680 GO:0005515
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 601 635 - -
Aev06g0305 967 Pfam Dip2/Utp12 Family 821 921 IPR007148 -
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 601 642 IPR001680 GO:0005515
Aev06g0305 967 CDD WD40 113 538 - -
Aev06g0305 967 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 402 719 IPR011047 -
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 159 194 - -
Aev06g0305 967 Gene3D - 668 733 IPR015943 GO:0005515
Aev06g0305 967 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 235 IPR001680 GO:0005515
Aev06g0305 967 PANTHER WD REPEAT-CONTAINING PROTEIN 3 1 966 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0305 598 738 Miscellaneous Gene Families AT5G08390 26.241 3.23e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0305 K14556 - gmx:100775810 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0305 06 2281125 2286824 Aev06g0305 06 2281125 2286824 ECH