Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0218 ATGAGAGATTTCGTGATCCTTGGCTCCTCCATTGTCACTCCACCCAACCCTCCTCCTCCTTCTTCTTCTTCTTCATCTTCACCGATTCCTTCTCCTTCCCACCACCACCGCACAATCAAGCCCCAAAACAAGCAGTCTCTTCCAAAGCTCACCCTCCAATCACCCATCAACCATGGCGCCAAGCTCAACGACCTCGAAACTGTCCTAGAGGGCGTCCTCCGTTCTGGGGTCCACGTGCATGGCCTCTCCCAGCAGCTAATCCTGGGGATTCGTGGTGGTGGTGGTGGCGGCAGGATGGTTCGAGCTGTGATTGACACTCTCAAGAGAGTTCAGGAGCTTGGGATCTCTCTTTCCCCTCATTTTGATGGCGCTGCCATCGACGCCATCGGACAAGAGTGTCGCCGTTTGGTCAAATGTGCTCAAATTGACGATGCTGTTGAACTCATGGAGGTTCTCTCACGTTTCCAGTTATCAGTCAGAGAACTTGTTCAACCATCTGACATAATAAAAAGTTGTGTTCTTCGCCGTAAACCAGATTTAGCTGTGAGGTATGCATGTCTTCTTCCTCATGCACAAATATTATTCTGCGACATTATACGCGAATTCGGCAAAAGGAAAGATTTAGTGTCTGCTTTGAAAGCATATGAAGCATCAAAGAAAAACTTGGATAGTCCCAACATGTACATATACCGGGCAATAATTGATGTCTGTGGTCTCTGTGGTGAATTCATGAAATCTAGGTACATATATGAGGATTTACTCAATCAGAAGATCACTCCAAATATATATGTAATCAACAGTCTCATGAATGTGAATACCAATGATCTTAGCTACACGTTAAGTGTATATCAGAATATGCAGAATCTTGGTTTGAAGCCAGATATGACATCTTATAACATCCTGCTGAAAGCATGCTGTGTTGCTGGAAGAGTTGACCTGGCCCAAGACATTTATAGGGAACTTAAGCATTTGGAATCAGTAGGAAAGCTGAAATTAGATGTTTTTACATACAGCACGATTATAAAGGTCTTAGCGGATGCAAAAATGTGGCAAATGGCTCTAAATATCAAGAAGGATATGATGTCTGCTGGTGTTTCTCTTAATACTGTTGCATGGTCATCATTAATCAATGCCTGCGCACATGCGGGGCTTGTAGAGCAGGCAATTCAATTATTTGAAGAAATGCTTTTGGCTGGCTGCGAACCTAATACACAATGTTTTAACATCATTTTGCATGCATGTGTTGAAGCTTGCCAGTATGACAGGGCTTTTCGCATTTTCTATTCTTGGAAGGGAAATAAGATGTTGGGGTCCCTTGGTGAAGGGACCAATAGCAGCAAGTTAGGGCATAGAGACATGCATACTGCTACTATGGTGCCAAATGGAATTTCTAGTTCACATATCTTAAGTTTTGCTGAGAGATTCCCTTTCAGACCAACAACAGCAACCTATAATATTTTACTGAAGGCTTGTGGTACTGATTACTACCATGCAAAAGCATTAATCAAGGAGATGAAAAGGGTTGGTCTCTCCCCTAATCAAATAAGCTGGTCAATTTTGATAGATATATGTGGAGGATCAGAAAATGTGGAAGGTGCCATTGAGATTTTGAATACCATGGTTGAAGCTAGAATTAAACCTGATGTTGTTGCATATACAACAGCCATTAAGGTTTGTGTGGAAAGTAAGAATTTTAAGCAAGCATTATTGTTATATGAAGAAATGAAAAGATATGAGATACATCCAAATTTGGGAGAAGAATTAAAGAGTATATATCATCAAGTTAACCCTATTGATTTGACAATTGTCTACTCAGTGACATATAACACACTACTAAGGGCACGCAGTAAATATGGTTCAGTACTTGAGGTGCAACAATGCCTGACCATATACCAGGACATGCGAAAAGCAGGGTACAAACCCAATGACTATTATTTGGAACAACTGATTGAGGAGTGGTGTGAAGGAGTGATACAAGAACAAGATGACAGAGAGAACCAAAGGGAGTATTTTTCCAGCAATATATCTGAATTAGATAGACCCCAGAGTTTGCTTCTTGAAAAAATTGCAGCACACTTGCTGAAGAGGGTAGCTGACATCCTAGCTATTGATGTTCAAGGGCTCTCAAAGGTTGAAGCTCGCTTGGTTGTTCTTGCGGTTCTTCGAATGATCAAAGAGAACCATGCTTCCGGACATTCAGTGAATGATGACATATTGATCATCATAGGAGCTAATAAAGCAGAAGAAAATCCAGCTGAAAACATATTAGAAGTGCAAGAGGCAATAATAAAGCTTCTTAAGAACGAGTTAGGACTTGAAGTTTTTCCAGCCAAAACCAGATTTGCACCATGTGACACACCAAAGTTAGAGAATCCCACCCTTTCAGATCTCAGCGTAGAAGCACTACCAGGAAAGAATGCTGTATTACCTGCAGTAATGGGGTTTCAGAACAGGAGACCTGCAGTTCTGCATAGGTTGAAGGTCACCAAGAATTCTTTGCACCATTGGTGCTAG 2514 0.4173 MRDFVILGSSIVTPPNPPPPSSSSSSSPIPSPSHHHRTIKPQNKQSLPKLTLQSPINHGAKLNDLETVLEGVLRSGVHVHGLSQQLILGIRGGGGGGRMVRAVIDTLKRVQELGISLSPHFDGAAIDAIGQECRRLVKCAQIDDAVELMEVLSRFQLSVRELVQPSDIIKSCVLRRKPDLAVRYACLLPHAQILFCDIIREFGKRKDLVSALKAYEASKKNLDSPNMYIYRAIIDVCGLCGEFMKSRYIYEDLLNQKITPNIYVINSLMNVNTNDLSYTLSVYQNMQNLGLKPDMTSYNILLKACCVAGRVDLAQDIYRELKHLESVGKLKLDVFTYSTIIKVLADAKMWQMALNIKKDMMSAGVSLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRIFYSWKGNKMLGSLGEGTNSSKLGHRDMHTATMVPNGISSSHILSFAERFPFRPTTATYNILLKACGTDYYHAKALIKEMKRVGLSPNQISWSILIDICGGSENVEGAIEILNTMVEARIKPDVVAYTTAIKVCVESKNFKQALLLYEEMKRYEIHPNLGEELKSIYHQVNPIDLTIVYSVTYNTLLRARSKYGSVLEVQQCLTIYQDMRKAGYKPNDYYLEQLIEEWCEGVIQEQDDRENQREYFSSNISELDRPQSLLLEKIAAHLLKRVADILAIDVQGLSKVEARLVVLAVLRMIKENHASGHSVNDDILIIIGANKAEENPAENILEVQEAIIKLLKNELGLEVFPAKTRFAPCDTPKLENPTLSDLSVEALPGKNAVLPAVMGFQNRRPAVLHRLKVTKNSLHHWC* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0218 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 294 324 IPR002885 -
Aev06g0218 837 PANTHER OS03G0284900 PROTEIN 51 830 - -
Aev06g0218 837 Gene3D Tetratricopeptide repeat domain 464 677 IPR011990 GO:0005515
Aev06g0218 837 Gene3D Tetratricopeptide repeat domain 326 459 IPR011990 GO:0005515
Aev06g0218 837 Gene3D Tetratricopeptide repeat domain 192 325 IPR011990 GO:0005515
Aev06g0218 837 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 51 830 - -
Aev06g0218 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 513 547 IPR002885 -
Aev06g0218 837 MobiDBLite consensus disorder prediction 12 26 - -
Aev06g0218 837 MobiDBLite consensus disorder prediction 7 45 - -
Aev06g0218 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 333 367 IPR002885 -
Aev06g0218 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 368 402 IPR002885 -
Aev06g0218 837 Pfam Pentatricopeptide repeat domain 478 526 IPR002885 -
Aev06g0218 837 Pfam Pentatricopeptide repeat domain 536 584 IPR002885 -
Aev06g0218 837 Pfam PPR repeat 335 365 IPR002885 -
Aev06g0218 837 Pfam Pentacotripeptide-repeat region of PRORP 203 321 IPR033443 -
Aev06g0218 837 TIGRFAM PPR: pentatricopeptide repeat domain 297 322 IPR002885 -
Aev06g0218 837 TIGRFAM PPR: pentatricopeptide repeat domain 370 404 IPR002885 -
Aev06g0218 837 TIGRFAM PPR: pentatricopeptide repeat domain 515 549 IPR002885 -
Aev06g0218 837 TIGRFAM PPR: pentatricopeptide repeat domain 335 368 IPR002885 -
Aev06g0218 837 TIGRFAM PPR: pentatricopeptide repeat domain 550 583 IPR002885 -
Aev06g0218 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 548 582 IPR002885 -
Aev06g0218 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 604 641 IPR002885 -
Aev06g0218 837 Pfam PPR repeat family 368 414 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0218 229 654 Glycosyltransferase AT1G05670 20.128 2.07e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0218 - - gmx:100794606 1132.09