Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0204 ATGTTAAGGAGACGATCCACCTTGAAAGGGTTAGGTTACGTATTCTCTTCTTCTTCGTCCCACTCCCAGTTGTTAATTGTTCGCAGATACAAGCAATCAACAATGCCTCGCTATGAAGATAAGTATGGAAACACACGCCTCTATGTGGGCCGTCTGTCTTCCAGGACGCGTTCCAGTGATCTCGAGCGAGTCTTCAGCAGATATGGAAGAGTTCGAGATGTTGATATGAAGCATGATTACGCCTTCGTTGAATTTAGCGATCCTCGAGATGCTGATGATGCAAGATATAGCTTGGATGGCCGTGATGTTGATGGAAGTCGTATTATTGTGGAATTTGCAAAAGGGGTTCCTCGTGGGTCCCGTGAATATTTGGGTCGAGGCCCTCCTCCTGGAACTGGGCGCTGCTTTAACTGTGGAATTGATGGCCATTGGGCTCGAGATTGCAAAGCTGGGGATTGGAAGAACAAGTGTTACCGGTGTGGGGAGAGAGGTCATATAGAGAAGAACTGCAAGAACAGTCCCAAAAAGTTGAGTAGACGTGGACGAAGTTATTCACGTTCTCCTGCCAGGTCACGTTCCCGTTCTCCACGTCGTGGCAGAAGCCGAGATCGGAGTTACAGTCCAGCTCGCAGTTACAGTCGATCAAGATCCCCAGCTAGGGGAGATCGAAGCCCAGTTCGTGAAGATAGATCTGAGAGTCCTCGCGATAGAAGCCCAGAGCCTAAAAGCAAGCGCAGTCCATCACCAGAGGAAGAAAGCCCACAGAAGAGAGGTGAAGCATCTCCTGGTAATGATAGGATGGTCACCCAGCAAGATGGGTCTGACTACAGTGATGGTCCCAGAGCGAAGAGCAGAAGCCCAGCTAGTCCAGCCAAGGACCATGATGATAGCAGCCCTAAAGGCCGTGGCCCCAGCCCCAGCCCTAGCCCTAGAGATGAAGACAGGAGCCCTATTGATGATGAAGATGACAATAACCGCAATCTGCCAAGAGGTAGTGAGTCACCTTAA 1008 0.502 MLRRRSTLKGLGYVFSSSSSHSQLLIVRRYKQSTMPRYEDKYGNTRLYVGRLSSRTRSSDLERVFSRYGRVRDVDMKHDYAFVEFSDPRDADDARYSLDGRDVDGSRIIVEFAKGVPRGSREYLGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSRRGRSYSRSPARSRSRSPRRGRSRDRSYSPARSYSRSRSPARGDRSPVREDRSESPRDRSPEPKSKRSPSPEEESPQKRGEASPGNDRMVTQQDGSDYSDGPRAKSRSPASPAKDHDDSSPKGRGPSPSPSPRDEDRSPIDDEDDNNRNLPRGSESP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0204 335 SUPERFAMILY Retrovirus zinc finger-like domains 125 173 IPR036875 GO:0003676|GO:0008270
Aev06g0204 335 SMART c2hcfinal6 134 150 IPR001878 GO:0003676|GO:0008270
Aev06g0204 335 SMART c2hcfinal6 156 172 IPR001878 GO:0003676|GO:0008270
Aev06g0204 335 Gene3D - 125 153 - -
Aev06g0204 335 Gene3D - 154 200 - -
Aev06g0204 335 SUPERFAMILY RNA-binding domain, RBD 34 134 IPR035979 GO:0003676
Aev06g0204 335 MobiDBLite consensus disorder prediction 168 335 - -
Aev06g0204 335 Gene3D - 34 123 IPR012677 -
Aev06g0204 335 ProSiteProfiles Zinc finger CCHC-type profile. 134 149 IPR001878 GO:0003676|GO:0008270
Aev06g0204 335 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 40 317 - -
Aev06g0204 335 ProSiteProfiles Zinc finger CCHC-type profile. 156 172 IPR001878 GO:0003676|GO:0008270
Aev06g0204 335 MobiDBLite consensus disorder prediction 175 199 - -
Aev06g0204 335 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47 108 IPR000504 GO:0003723
Aev06g0204 335 SMART rrm1_1 46 111 IPR000504 GO:0003723
Aev06g0204 335 Pfam Zinc knuckle 134 149 IPR001878 GO:0003676|GO:0008270
Aev06g0204 335 Pfam Zinc knuckle 155 172 IPR001878 GO:0003676|GO:0008270
Aev06g0204 335 MobiDBLite consensus disorder prediction 307 328 - -
Aev06g0204 335 PANTHER SPLICING FACTOR, PUTATIVE-RELATED 40 317 - -
Aev06g0204 335 MobiDBLite consensus disorder prediction 216 259 - -
Aev06g0204 335 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 115 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0204 Aev-Chr6 1576640 1579815 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0204 K12896 - gmx:100813237 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0204 06 1576640 1579815 Aev06g0204 06 1576640 1579815 ECH