Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0197 ATGAAGAAACAGTTGACAGGTATTCGAGGTGATTCTCCCTTACACTCGGCAATCCGAGCAGGAAACTTAGAATTGGCTATGCAAATCATTTCTGAAAATGGGGGAGAAGAATTAAAGGAGTTGCTCTCAAATAAAAATAACTCTGGTGAAACTGCCTTGTACGTTGCTGCTGAAAATGGTCATCTTGATATAGTGAAGGAATTGATCAAATACCATGATATTGGGTTGGTCAGCGACAAAGCTAAAAATGGATTTGATGCATTCCATATTGCTGCTAAAAATGGGAACTTGGAGGTATTGAAGGTCCTCATGGAGGCCATTCCTGAAGTTTCGATGACCGTTGATCTGTCCAACACTACTGCACTGCACACTGCTGCAGCACAAGGACATATTGAGATAGTAGATTTTCTCTTGGAAAAAGGTAGCAGCCTGATAACTATTGCCAAAAGCAATGGGAAAACCGTATTGCATTCTGCTGCAAGAAATGGCCATGTGGAGATCATCAAGGCCCTTCTGAGCAGAGAACCTGAAATTGCAATTAGAACTGATAAGAAGGGGCAGACAGCACTCCATATGGCAGTCAAAGGACAAAACCTTGAGTTGGTGGATGAGCTTTTGAAATCAAACCCATCTTTGGTGAACATGGTGGATACGAAGGGAAACACTGCTCTGCATATAGCAACCCGAAAGGGTCGTCTGCAGATTGTTCAGAAGATACTAGATTGCAGAGAAATAGACACAGATGTTGTTAATAAATCTGGCGAAACTGCTCTGGATACCGCTGAGAAAAATAATCGAAAGGACATTGCCAACTTCCTGCAAGTTCGAGGAGCTAAAAGTGCAAAGTCCATCAAGTCACCTGCCACAAACGCGGCCCTTGAACTCAAACGAACAGTGAGTGACATAAAAAGTGGAGTTCACAACCAGCTGGAAAACACAATGAAAACACAGAGACGCATGCAAGGCATAGCCAAAAGAATTAACAAAATGCATTCTGAAGGGCTAAACAATGCAATCAACTCCAACACTTTAGTTGCTGTCCTTATTGCAACAGTTGCTTTTGCAGCCATATTTAATGTCCCGGGCCAGTATCCTCAGAACGCGGACAACCTCCCTCCCGGAATGTCTCCAGGGGAAGCAAACATCGCTCCCAATTTCGGGTTCATGATATTCATAATCTTCGATTCAGCCGCCCTCTTCATATCGTTGGCTGTCGTGGTAGTCCAAACATCAGTGGTTGTTATTGAGAGGAAAGCAAAGAAACAGATGATGGCTGTTATGAACAAGTTGATGTGGATATGCTGTGTCCTAATCTCTGTGGCATTCCTTGCTATGTCATACATTGTTGTAGGAGAGCACAAAGGGTTGGCCATAGCAGCAACGGTTCTAGGAACTGTGATTATGGCAGCCACTTTAGGAACACTTTGTTATTGGGTGATAGCTCACAGACTCGAGGCCGCGAGATTGCACAGTCTTAGGACGACAATGAGCAGCCGGCAATCATTGTCTATGTCAGTGATGTCAGGTTCAGAGAATGAGTATAATAAGACAGTGTATGCAATATAA 1566 0.4349 MKKQLTGIRGDSPLHSAIRAGNLELAMQIISENGGEELKELLSNKNNSGETALYVAAENGHLDIVKELIKYHDIGLVSDKAKNGFDAFHIAAKNGNLEVLKVLMEAIPEVSMTVDLSNTTALHTAAAQGHIEIVDFLLEKGSSLITIAKSNGKTVLHSAARNGHVEIIKALLSREPEIAIRTDKKGQTALHMAVKGQNLELVDELLKSNPSLVNMVDTKGNTALHIATRKGRLQIVQKILDCREIDTDVVNKSGETALDTAEKNNRKDIANFLQVRGAKSAKSIKSPATNAALELKRTVSDIKSGVHNQLENTMKTQRRMQGIAKRINKMHSEGLNNAINSNTLVAVLIATVAFAAIFNVPGQYPQNADNLPPGMSPGEANIAPNFGFMIFIIFDSAALFISLAVVVVQTSVVVIERKAKKQMMAVMNKLMWICCVLISVAFLAMSYIVVGEHKGLAIAATVLGTVIMAATLGTLCYWVIAHRLEAARLHSLRTTMSSRQSLSMSVMSGSENEYNKTVYAI* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0197 521 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Aev06g0197 521 ProSiteProfiles Ankyrin repeat region circular profile. 48 70 - -
Aev06g0197 521 ProSiteProfiles Ankyrin repeat region circular profile. 219 241 - -
Aev06g0197 521 ProSiteProfiles Ankyrin repeat region circular profile. 9 36 - -
Aev06g0197 521 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Aev06g0197 521 ProSiteProfiles Ankyrin repeat profile. 9 36 IPR002110 GO:0005515
Aev06g0197 521 ProSiteProfiles Ankyrin repeat profile. 185 212 IPR002110 GO:0005515
Aev06g0197 521 Pfam Ankyrin repeats (many copies) 211 261 IPR002110 GO:0005515
Aev06g0197 521 ProSiteProfiles Ankyrin repeat region circular profile. 185 212 - -
Aev06g0197 521 Pfam Domain of unknown function 333 449 IPR026961 -
Aev06g0197 521 ProSiteProfiles Ankyrin repeat region circular profile. 83 105 - -
Aev06g0197 521 SMART ANK_2a 151 180 IPR002110 GO:0005515
Aev06g0197 521 SMART ANK_2a 253 282 IPR002110 GO:0005515
Aev06g0197 521 SMART ANK_2a 48 76 IPR002110 GO:0005515
Aev06g0197 521 SMART ANK_2a 83 112 IPR002110 GO:0005515
Aev06g0197 521 SMART ANK_2a 9 40 IPR002110 GO:0005515
Aev06g0197 521 SMART ANK_2a 185 215 IPR002110 GO:0005515
Aev06g0197 521 SMART ANK_2a 219 249 IPR002110 GO:0005515
Aev06g0197 521 SMART ANK_2a 117 147 IPR002110 GO:0005515
Aev06g0197 521 Gene3D - 2 107 IPR036770 -
Aev06g0197 521 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Aev06g0197 521 ProSiteProfiles Ankyrin repeat region circular profile. 151 178 - -
Aev06g0197 521 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 521 - -
Aev06g0197 521 Gene3D - 108 276 IPR036770 -
Aev06g0197 521 PANTHER ANKYRIN REPEAT PLANT PROTEIN 1 521 - -
Aev06g0197 521 SUPERFAMILY Ankyrin repeat 10 274 IPR036770 -
Aev06g0197 521 ProSiteProfiles Ankyrin repeat profile. 219 241 IPR002110 GO:0005515
Aev06g0197 521 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Aev06g0197 521 Pfam Ankyrin repeats (3 copies) 151 209 IPR002110 GO:0005515
Aev06g0197 521 Pfam Ankyrin repeats (3 copies) 9 74 IPR002110 GO:0005515
Aev06g0197 521 Pfam Ankyrin repeats (3 copies) 83 143 IPR002110 GO:0005515
Aev06g0197 521 ProSiteProfiles Ankyrin repeat profile. 48 70 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0197 Aev-Chr6 1535638 1538099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0197 1 505 Miscellaneous Gene Families AT1G07710 66.008 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0197 - - gmx:100787392 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0197 06 1535638 1538099 Aev06g0197 06 1535638 1538099 ECH