Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0196 ATGGACCGAACCCCTCTCTCCCCTTACTCGGAGCCCGTGACTCCACGCACCCCAAGGCCCACATTGTTCATCTCCTCTTCCGGCAAGGCCCTCCTCGTCTCCAACTCCAACAAATCCCTCGCCTTCTCCAACTCCGGCAAGCGCTTCGACTCAGCTTCCAAGAAGAAGTACGTCACGCAGCTCACTGGCCGCCACAATGACACCGTCCTCCACCTCGCCGCACAGCGCGGCGATGCCGCCGCCGTCAGGCAAATCCTCGATGAAATCGATGCGCAGGTGACGGGGACGCTCAGTGGTGCTGAGTTTGATGCTGAGCTGGCGGATATAAGGTCGGCGATTGTTAACGAGGTCAATGAGTTGGGCGAGACCGCTCTGTTCACGGCGGCGGAGAAGGGGCACCTTGACGTCGTTAATGCGCTCCTCCCTTATATCTCCAAAGAGGCATTTTCATTCAAGAATCGGTCCGGGTTCGATGCCTTCCATATTGCTTCCAATCAAGGCCATAAAGCCATTGTAGAGGTGTTGCTAGACCATGATCCAGAGCTAATCAAGACATTTGCGCAATCAAACGCAACCCCTCTTATCTCTGCAGCCACGAGGGGTCATTCGGATGTTGTTGAACTGTTGCTATCTAAAGATCCTGGTCAGTTGGAGATAGCTAAGACGAACGGGAAGAATGCACTCCACTTAGCTGCTCGGCAAGGGCACGTTGAGGTGGTGAAAATGCTGGTGGCGCAGGATCAGCTGCTTGCTCGAAGGTCCGATAAGAAAGGACAATCTGCTCTGCACATGGCTGTAAAGGGTGTTAGCTGTGAAGTTGTGAGGCTTCTTCTTAATGCAGATGCTTCAATAGTCATGCTTACAGACAGGTTTGGAAATACTGCATTACATGTGGCCACCAGGAAGAAAAGAGCACAGATAGTGAATGAGTTATTATGTCTTCCTGATACCAATGTAAATGCCTTGACAAGAGTCCACAAAACACCTCTTGACCTTGCTGAAGCACTCCCAATATCTGAAGAAACCTTGGAGACAAAAGATTACCTTATTCGCCATGGTGCAGTTAAAGCGAGTGATCTCAACCAGCCAAGGGATGAGCTGGGTAAAACCATGACACAGATTAGAAACGATGTCTACTATCAACTTGAACAAACCCGGAAAACAAACAAGAACGTTAGCGGGATTGAAAATGAGCTAAGGAAACTGCACAGAGCTGGAATCAACAATGCCAAAAACTCAGTAACTGTGGTCGCTGTGCTGTTTGCAGCAATTGCATTTGCAGTACTTTTCACGGTTCCTGGTGGGGATGATGAGAAGGGTAAGGCTGTGATGGTGAAATCTGTTTCTTTCAAGGTCTTCTTCATATCCAATGCTATTGCACTCTTTTCTTCATTGGCTGTTGTGGTGGTTCAGATCACAATTGTTAGAGGGGAGACAAAATCTGAAAGGAAAGTTGTGGAAGTGATTAATAAGATGATGTGGTTAGCCTCTGTTTGCACCTCTGTTTCATTCATGGCTGCATCTTATATAGTTGTTGGTAGGCGAAGCCTGTGGGCTGCGATCCTTATTACTGTTGTTGGGGCTATTGTGATGGGTGGTGTTCTTGGCACCATGACTTACTATGTGGTGAAAACCAAACGTCTCCGAAAAGTGAGGAAGAAAAAGAAGGAGGAAAAGATCTCAAGGGTTGGAAAATATTCATGGCGTCATTCGGATTCTGATTCAGAAGTAAATCCAGTTTATGCCATTTGA 1752 0.48 MDRTPLSPYSEPVTPRTPRPTLFISSSGKALLVSNSNKSLAFSNSGKRFDSASKKKYVTQLTGRHNDTVLHLAAQRGDAAAVRQILDEIDAQVTGTLSGAEFDAELADIRSAIVNEVNELGETALFTAAEKGHLDVVNALLPYISKEAFSFKNRSGFDAFHIASNQGHKAIVEVLLDHDPELIKTFAQSNATPLISAATRGHSDVVELLLSKDPGQLEIAKTNGKNALHLAARQGHVEVVKMLVAQDQLLARRSDKKGQSALHMAVKGVSCEVVRLLLNADASIVMLTDRFGNTALHVATRKKRAQIVNELLCLPDTNVNALTRVHKTPLDLAEALPISEETLETKDYLIRHGAVKASDLNQPRDELGKTMTQIRNDVYYQLEQTRKTNKNVSGIENELRKLHRAGINNAKNSVTVVAVLFAAIAFAVLFTVPGGDDEKGKAVMVKSVSFKVFFISNAIALFSSLAVVVVQITIVRGETKSERKVVEVINKMMWLASVCTSVSFMAASYIVVGRRSLWAAILITVVGAIVMGGVLGTMTYYVVKTKRLRKVRKKKKEEKISRVGKYSWRHSDSDSEVNPVYAI* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0196 583 MobiDBLite consensus disorder prediction 1 20 - -
Aev06g0196 583 Gene3D - 182 284 IPR036770 -
Aev06g0196 583 Pfam Domain of unknown function 407 511 IPR026961 -
Aev06g0196 583 SMART ANK_2a 291 321 IPR002110 GO:0005515
Aev06g0196 583 SMART ANK_2a 155 184 IPR002110 GO:0005515
Aev06g0196 583 SMART ANK_2a 223 252 IPR002110 GO:0005515
Aev06g0196 583 SMART ANK_2a 257 286 IPR002110 GO:0005515
Aev06g0196 583 SMART ANK_2a 120 150 IPR002110 GO:0005515
Aev06g0196 583 SMART ANK_2a 189 219 IPR002110 GO:0005515
Aev06g0196 583 SMART ANK_2a 65 95 IPR002110 GO:0005515
Aev06g0196 583 Pfam Ankyrin repeats (3 copies) 189 245 IPR002110 GO:0005515
Aev06g0196 583 Pfam Ankyrin repeats (3 copies) 249 320 IPR002110 GO:0005515
Aev06g0196 583 Pfam Ankyrin repeats (3 copies) 116 179 IPR002110 GO:0005515
Aev06g0196 583 ProSiteProfiles Ankyrin repeat region circular profile. 257 284 - -
Aev06g0196 583 Gene3D - 38 181 IPR036770 -
Aev06g0196 583 ProSiteProfiles Ankyrin repeat region circular profile. 223 244 - -
Aev06g0196 583 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1 32 576 - -
Aev06g0196 583 SUPERFAMILY Ankyrin repeat 67 336 IPR036770 -
Aev06g0196 583 Gene3D - 285 377 IPR036770 -
Aev06g0196 583 ProSiteProfiles Ankyrin repeat profile. 257 289 IPR002110 GO:0005515
Aev06g0196 583 ProSiteProfiles Ankyrin repeat profile. 223 255 IPR002110 GO:0005515
Aev06g0196 583 PANTHER CASKIN 32 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0196 Aev-Chr6 1516333 1518490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0196 5 583 Miscellaneous Gene Families AT3G09550 68.825 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0196 - - gmx:100801840 808.905