Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0174 ATGGTGGGTATGATATCGTTGGTAACGGGGTGGCGAGGTCCAAGCGGGTTTGGATCAGCTTCAACCGCTGAGCAGGTTACTAAAGGAATCGATGGAACCAACCTCACTGCAATTATCACCGGGGGAGCAAGTGGTATTGGGTTGGAAACAGCGCGAGTTTTGAGTCTAAGGAAGGTGCATGTTATAATTGCTGCACGAAACGTAGCTTCTGCAAAGGAGGCAAAACAACAATTACTAGAGGAGAATGAGAATGCTCGAGTCGACATTCTGAAGCTCGATTTGTGCTCTGTCAAATCTGTTCGATCATTTGTCGACAGCTTCCTCGCTCTTGATCTTCCTCTCAACATCTTAATAAACAATGCTGGGGTCATGTTCTGTCCTTTCAAGCTCTCAGAGGATGGGGTTGAGATGCAGTTTGCAACAAACCATCTTGGGCATTTCCTCTTGACGAATCTTCTTCTCGACAAGATGAAACAAACTGCAGAAACTACTGGTATTGAGGGCAGGATCATAAACTTGTCATCCATAGCCCATAACCTCACTTACAGAAAGGGGATCAGATTTGATAAGATCAATGAGCGAAAAGGTTATGGTAGCAAGAAAGCTTATGGGCAGTCTAAGTTAGCCAACATATTACACTCAAATGAGCTTTCTCGTCGCCTGAAGGAAGAGGGTGCAAACATCACAGTTAACTCAGTACACCCAGGAGTGATTATGACTCCTCTTATGAGACATTCTTCTTGCCAAATGCACTTATTGAAGATCTTCACCTTCTACATATGGAAGAACGTCCCACAGGGAGCAGCGACAACATGCTATGTTGCTCTGCACCCAGGAGTGAAAGGTGTGAGTGGGAAGTACTTCGTGGATTGCAATCAGATTAAACCAAGTTCATTTGCCTCCAACAAACAGCTAGCCAAAAAGCTTTGGGATTTCAGCGATAAGATGATCAATGCAATTTCAAAAGCTTAA 972 0.4424 MVGMISLVTGWRGPSGFGSASTAEQVTKGIDGTNLTAIITGGASGIGLETARVLSLRKVHVIIAARNVASAKEAKQQLLEENENARVDILKLDLCSVKSVRSFVDSFLALDLPLNILINNAGVMFCPFKLSEDGVEMQFATNHLGHFLLTNLLLDKMKQTAETTGIEGRIINLSSIAHNLTYRKGIRFDKINERKGYGSKKAYGQSKLANILHSNELSRRLKEEGANITVNSVHPGVIMTPLMRHSSCQMHLLKIFTFYIWKNVPQGAATTCYVALHPGVKGVSGKYFVDCNQIKPSSFASNKQLAKKLWDFSDKMINAISKA* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0174 323 PANTHER RETINOL DEHYDROGENASE 3 319 - -
Aev06g0174 323 Pfam short chain dehydrogenase 36 179 IPR002347 -
Aev06g0174 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Aev06g0174 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Aev06g0174 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Aev06g0174 323 Coils Coil 68 88 - -
Aev06g0174 323 Gene3D - 28 320 - -
Aev06g0174 323 CDD retinol-DH_like_SDR_c_like 36 310 - -
Aev06g0174 323 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 319 - -
Aev06g0174 323 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Aev06g0174 323 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Aev06g0174 323 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Aev06g0174 323 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Aev06g0174 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 296 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0174 Aev-Chr6 1386053 1388170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0174 35 242 Miscellaneous Gene Families AT2G29150 27.230 1.46e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0174 K11153 - gmx:100801849 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0174 06 1386053 1388170 Aev06g0174 06 1386053 1388170 ECH